Ailuropoda melanoleuca (giant panda): 100481897
Help
Entry
100481897 CDS
T01329
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04721
Synaptic vesicle cycle
aml04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100481897 (SLC6A4)
04721 Synaptic vesicle cycle
100481897 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aml02000
]
100481897 (SLC6A4)
Transporters [BR:
aml02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100481897 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
100481897
NCBI-ProteinID:
XP_034496390
Ensembl:
ENSAMEG00000003959
LinkDB
All DBs
Position
13:3420100..3451870
Genome browser
AA seq
630 aa
AA seq
DB search
METTPLNSQKEQSACKDKEDCQENGVLQKGVPVPEDKVEPGHISNGYSAVPSPGAGDDTR
HSIPAATTVLVAEAHEGDRETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICVIAFYIASYYNTIM
AWALYYLVSSFTDELPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLSLCIMLIFTVIYFSIWKGVKMSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRREWFVLAVVVTCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVALVEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRTC
WVAISPLFLLFIICSFLTSPPQLRLFQYDYPPWSAVLGYCVGTSSFICIPTYIAYRLIVT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttaaactcccagaaggaacagtcagcgtgtaaggataaagaagat
tgtcaggaaaatggagttctgcagaagggtgtccctgtccctgaggataaggtggagcct
ggccacatctccaacgggtactcagcggtgccgagcccgggtgccggagatgacactcgg
cactccattccggctgccaccaccgtgctagtggctgaggctcatgaaggggaccgggag
acgtggggcaagaagatggatttcctcctctccgtcattggctatgccgtggacctgggc
aacgtctggcgctttccctacatatgttaccagaatggagggggggcgttcctcctgccc
tacacgatcatggccattttcggggggatcccactgttctacatggagctcgcgctgggc
cagtaccaccgaaacggatgcatttcgatatggaggaaaatctgcccaattttcaaaggg
atcggttacgccatctgcgtcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcgtctcctccttcaccgacgagctgccctggaccagctgc
acgaactcctggaacaccggcaactgcaccaactacttctccgggaacaacgtcacctgg
acgctgcactcgacgtcccccgcagaagaattttacacgcgccacgtcctgcagatccat
cggtccaagggacttcaggacctggggggcatcagctggcagctgtccctctgcatcatg
ctcatcttcactgtcatctacttcagcatctggaagggtgtcaaaatgtccggcaaggtg
gtatgggtgacagccactttcccttatatcatcctttccatcttgctggtaaggggggcc
accctccctggagcctggagaggtgttctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgcggccgctcagatcttcttctctcttggtcctggc
tttggggtcctgttggctttcgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagcgtggtgaactgcatgacgagctttgtttccggatttgtcatcttc
acagtgctcgggtacatggccgagatgcggaacgaggatgtgtctgaggtggccaaagac
gcaggccccagcctcctcttcatcacgtacgcagaagccatagccaacatgccggcatcc
accttctttgccatcatcttcttcctgatgctaatcacgctgggcctggacagcaccttt
gcaggcttggagggcgtgatcacagctgtgctggacgagtttccgcacgtctgggccaag
cgccgggagtggtttgtgcttgccgtggtcgttacctgcttcttcggatccctggccacc
ctgacttttggaggggcctatgtggtgaagctgctggaggagtatgccacggggcccgcg
gtgctcacagtggccctcgtcgaggccgtggctgtgtattggttttacggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccccgggtggttttggaggacctgc
tgggtagccatcagccctctctttctcctgttcatcatctgcagctttctgacgagcccg
ccgcagctgcgccttttccagtacgactaccccccgtggagcgccgtcctgggctactgc
gtggggacgtcgtctttcatctgcatccccacgtacatagcgtaccggctgatcgtcact
ccagggacctttaaggagcgtattattaaaggtatcaccccagaaacagcaacggaaatt
ccctatggggacatccacttgaacgccatataa
DBGET
integrated database retrieval system