KEGG   Ailuropoda melanoleuca (giant panda): 100482703
Entry
100482703         CDS       T01329                                 
Symbol
POLR2G
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03020  RNA polymerase
aml03420  Nucleotide excision repair
aml05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100482703 (POLR2G)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100482703 (POLR2G)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100482703 (POLR2G)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aml03021]
    100482703 (POLR2G)
   03019 Messenger RNA biogenesis [BR:aml03019]
    100482703 (POLR2G)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100482703 (POLR2G)
Transcription machinery [BR:aml03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100482703 (POLR2G)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100482703 (POLR2G)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100482703 (POLR2G)
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 100482703
NCBI-ProteinID: XP_002925403
Ensembl: ENSAMEG00000006386
UniProt: G1LIJ3
LinkDB
Position
16:82189821..82193160
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttctatcacatctccctggagcacgagatcctgttgcacccgcgctacttcggcccc
aacctgctcaacacagtaaagcagaagctcttcaccgaggtggaggggacctgcaccggc
aagtatggctttgtaattgctgtcaccaccatcgacaatattggtgctggtgtgatccag
ccaggccgaggctttgtcctttatccggttaagtacaaggccattgtcttccggcccttt
aaaggggaggtcgtggatgctgtcgtcactcaagtgaacaaggttgggctcttcacagaa
attggacctatgtcttgcttcatctctcgacactccatcccgtcagagatggagtttgat
cccaactccaacccaccgtgttacaagacaatggacgaggacattgtgattcagcaggat
gatgagatccgcttgaagattgtggggacccgtgtggacaagaatgacatttttgctatt
ggctctctgatggacgattacttggggcttgtgagctga

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