Amycolatopsis methanolica: AMETH_4080
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Entry
AMETH_4080 CDS
T03230
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq00906
Carotenoid biosynthesis
amq01100
Metabolic pathways
amq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
AMETH_4080
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amq01006
]
AMETH_4080
Enzymes [BR:
amq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
AMETH_4080
Prenyltransferases [BR:
amq01006
]
Terpene biosynthesis
Squalene/phytoene synthase
AMETH_4080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AIJ24172
UniProt:
A0A076N2L8
LinkDB
All DBs
Position
complement(4216190..4217050)
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AA seq
286 aa
AA seq
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MTTPTLQQAYATCEDITRTEARNFYWGIRLLTRQRRSALCAVYALARRVDDIGDGDLPVE
EKAAQLEIVRKELAALDRSTDPVMVAVADAAHRHPVPLEAFEELLDGVWMDIEGRRYGTF
DELTEYCRCVAGSIGRLCLGVFGHKPHPQATRYADALGIALQQTNILRDIREDLRNGRIY
LPTEDLDAFGVELRITDGALADPDGGLANLIRHSAARAREWYADGMRLGPLLDRRSGACC
LAMAGIYRQLLERIADDPAAVYDKRLSLSGREKLGVAVRALGGRAA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacccacgctccaacaggcctacgccacctgcgaggacatcaccaggacggag
gcccgcaacttctactggggcatccggctgctcacgcgtcagcgccgctcggcgctgtgc
gcggtgtacgcgctggcgcggcgcgtcgacgacatcggcgacggcgacctgccggtcgag
gagaaggccgcgcagctggagatcgtgcgcaaggagctggccgcgctggaccgcagcacc
gacccggtgatggtcgcggtcgccgacgccgcccaccgccacccggtgccgctggaggcg
ttcgaggaactgctcgacggcgtctggatggacatcgagggccgccgctacggcaccttc
gacgagctgaccgagtactgccggtgcgttgccgggtcgatcggacggctgtgcctgggc
gtgttcgggcacaaaccgcacccgcaggccacccgctacgccgacgcgctcgggatcgcc
ctgcagcagacgaacatcctccgcgacatccgcgaagacctccggaacggccggatctac
ctgccgaccgaggacctcgacgcgttcggcgtcgagctgcggatcaccgacggcgcgctg
gccgacccggacggcggcctggcgaacctcatccggcacagcgcggcccgcgcccgcgag
tggtacgccgacggcatgcggctgggcccgctgctggaccgccgcagcggcgcgtgctgc
ctggcgatggccggcatctaccggcagctgctggaacggatcgccgacgaccccgccgcg
gtgtacgacaagcggctttcgttgtccgggcgggaaaagctgggcgtggcggtccgcgcg
ctgggcgggcgggcggcatga
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