Amycolatopsis sp. YIM 10: YIM_08965
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Entry
YIM_08965 CDS
T06270
Symbol
ermD
Name
(GenBank) rRNA adenine N-6-methyltransferase
KO
K00561
23S rRNA (adenine-N6)-dimethyltransferase [EC:
2.1.1.184
]
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amyy03009
]
YIM_08965 (ermD)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
amyy01504
]
YIM_08965 (ermD)
Enzymes [BR:
amyy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.184 23S rRNA (adenine2085-N6)-dimethyltransferase
YIM_08965 (ermD)
Ribosome biogenesis [BR:
amyy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YIM_08965 (ermD)
Antimicrobial resistance genes [BR:
amyy01504
]
Gene variants
Macrolide resistance genes
23S rRNA methyltransferases
YIM_08965 (ermD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Met_10
Methyltransf_31
MTS
Methyltransf_23
DUF397
PCMT
Methyltransf_PK
Motif
Other DBs
NCBI-ProteinID:
QFU87001
UniProt:
A0A5P9PFC6
LinkDB
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Position
complement(1811508..1812344)
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AA seq
278 aa
AA seq
DB search
MPANGSCHPARKTPNPSGVHFLAAPRIADELVRSAAITEADLVVDFGAGLGAITAPLART
GAEILAVERDPEFVRKLRSRLADSANVRVIPADARTFALPRKKFAVVASIPYAVSTALMR
RLLSPTASALDRAALIVEWGFAKRLSAASPRDLEVAWWAARFDLRLVRRVPARHFSPAPK
VDSAHLTVHRRGQPDKLVDRALWTLLQAAYRTPRAPARTAVAFLGRKPHRLLKANGIDPD
RPAATVPPAAWTALARQLAADRGLHWPPLPKALREDRR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaacgggtcctgtcaccctgcccggaaaaccccgaacccctccggcgtccac
ttcctcgccgcaccccggatcgccgacgagctggtgcgctcggccgcgatcaccgaagcc
gatctggtggtcgacttcggcgccggcctcggcgcgatcaccgcgccgctggccaggacc
ggcgccgaaatcctcgccgtggagcgggatcccgagttcgtgcgcaagctgcgcagccgg
ctcgccgactcggccaacgtccgggtgatcccggccgacgcccgcaccttcgccttgccc
cgcaagaagttcgccgtggtggcgagcattccgtacgcggtctcgaccgcgctcatgcgg
cggctgctcagcccgaccgcctcggcgctggaccgggcggccctgatcgtcgaatggggg
ttcgcgaaacgactcagcgcggccagcccgcgcgacctcgaagtcgcctggtgggcggcg
aggttcgacctgcggctggtgcggcgcgtcccggccaggcacttcagcccggctccgaag
gtggactcggcccacctgaccgtgcaccggcgcggccagccggacaagctcgtcgaccga
gcactgtggacactgctgcaggcggcctaccgcactccgcgcgcaccggcacggaccgcc
gtggccttcctcgggcgcaagccccaccgcctgctcaaggcgaacggcatcgatccggac
cgtccggccgcgaccgtgccaccggccgcgtggaccgcgctggccaggcagctcgccgcc
gatcgtggcctgcactggccgccgttgccgaaggctttgcgcgaagaccggcgctga
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