Amycolatopsis sp. YIM 10: YIM_10755
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Entry
YIM_10755 CDS
T06270
Symbol
tfdD
Name
(GenBank) Chloromuconate cycloisomerase
KO
K01856
muconate cycloisomerase [EC:
5.5.1.1
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00361
Chlorocyclohexane and chlorobenzene degradation
amyy00362
Benzoate degradation
amyy00364
Fluorobenzoate degradation
amyy00623
Toluene degradation
amyy01100
Metabolic pathways
amyy01120
Microbial metabolism in diverse environments
amyy01220
Degradation of aromatic compounds
Module
amyy_M00568
Catechol ortho-cleavage, catechol => 3-oxoadipate
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
YIM_10755 (tfdD)
00364 Fluorobenzoate degradation
YIM_10755 (tfdD)
00361 Chlorocyclohexane and chlorobenzene degradation
YIM_10755 (tfdD)
00623 Toluene degradation
YIM_10755 (tfdD)
Enzymes [BR:
amyy01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.1 muconate cycloisomerase
YIM_10755 (tfdD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
MenC_N
Motif
Other DBs
NCBI-ProteinID:
QFU87356
UniProt:
A0A5P9PGD0
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Position
complement(2160400..2161551)
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AA seq
383 aa
AA seq
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MKDLVVERVETFAVALPTLRSFGVAGGAVAVAGRPSVRVLVKVSADGVCGWGEATPIPAW
TYETAESIVSTIDRYLAPAILGRPCWDLDGVTAVFDRAINRGFSIGAPLAKSAVDLALHD
LLGRALGVPVGVLWGQRRTEEIELGWMVSGQTPGEVAARVAEGREAGYRAFKVKIGLHAD
DLDVVRAVREAAGPEAPLWVDANQAYSVDEAVRISRVLSELDVHAFEQPLPANDVVGLGR
LRAESAVPVALDESLRHPSDLATFVKLGAVDVAIAKVQRSGGLTLSRRLCSLAEDSGVRL
MGSGLTDSDLGLAASLHLFAAFGIGTPVDLNGRQFVDSAYATGETVRLDGGTAHVPTGPG
LGVEVDEAVVRELSLDVLGAGVP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacctggtggtcgagcgggtcgagaccttcgcggtggccctgccgacgctgcgc
tccttcggcgtggcgggcggcgcggtcgcggtggccgggcggcccagcgtgcgggtgctg
gtgaaggtcagcgcggacggcgtgtgcggctggggcgaggccacgcccatcccggcgtgg
acctacgaaaccgccgagtcgatcgtctccaccatcgaccgctacctggctccggcgatc
ctgggcaggccgtgctgggatctcgacggggtgaccgcggtgttcgaccgggcgatcaac
cggggcttctcgatcggcgcgccactggcgaaatcggcggtcgacctggcgttgcacgat
ctgctgggacgcgcgctcggggtgccggtcggggtgttgtgggggcagcgccggaccgag
gagatcgagctgggctggatggtctccgggcagacgcccggtgaggtggccgcgcgggtc
gccgagggacgcgaggccggttatcgcgcgttcaaggtgaagatcggcctgcacgccgat
gacctcgacgtggtccgagccgtgcgggaggcggccgggcccgaggcgccgctgtgggtg
gacgcgaaccaggcctactcggtggacgaggccgtgcggatctcccgcgttctgtccgaa
ttggacgttcatgccttcgagcagccgttgcccgccaacgacgtggtcggtctcggcagg
ctgcgcgcggagtccgcggtaccggtggcgctggacgagagcctgcgtcatccgagcgat
ctggccaccttcgtgaaactgggcgcggtcgacgtggccatcgcgaaggtgcagcgcagt
ggcggattgacgttgtcgcgccgattgtgctcgctggcggaggacagcggggtgcggttg
atgggctcggggctgaccgactcggatctcggactggccgcttcactgcacctgttcgcc
gcgttcggcatcggcacgccggtggatctgaacggcaggcagttcgtcgattccgcttac
gccaccggggaaaccgtgcgcctggacggcggtaccgcccacgtgccgaccggcccgggc
ctcggcgtggaggtcgacgaagcggtggtgcgggaactgtccttggacgtactgggcgca
ggagtgccctga
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