Amycolatopsis sp. YIM 10: YIM_13130
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Entry
YIM_13130 CDS
T06270
Symbol
frdB1
Name
(GenBank) Fumarate reductase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00020
Citrate cycle (TCA cycle)
amyy00190
Oxidative phosphorylation
amyy00650
Butanoate metabolism
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
amyy01120
Microbial metabolism in diverse environments
amyy01200
Carbon metabolism
Module
amyy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amyy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amyy_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YIM_13130 (frdB1)
00650 Butanoate metabolism
YIM_13130 (frdB1)
09102 Energy metabolism
00190 Oxidative phosphorylation
YIM_13130 (frdB1)
Enzymes [BR:
amyy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YIM_13130 (frdB1)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_7
Fer4_18
Fer2
Fer4_9
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
QFU87812
UniProt:
A0A5P9PI77
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All DBs
Position
2690235..2690999
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AA seq
254 aa
AA seq
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MGYKASFRVWRGDDTDGGLQDYTVEVNEGEVVLDIIHRLQATQAPDLAVRWNCKAGKCGS
CSAEINGRPRLLCMTRMSVFAEDEVITVTPMRTFPVIRDLVTDVSFNYTKAREIPSFTPP
ADLKPGDYRMQQVDVERSQEFRKCIECFLCQNTCHVVRDHEENKEAFAGPRYLMRIAELE
MHPLDVADRRDAAQDEHGLGYCNITKCCTEVCPEGIHITDNALIPMKERVADRKYDPIVW
LGNKLFRRGTSDRP
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggggtacaaggcgagcttccgggtctggcgcggcgacgacaccgacggcgggctgcag
gactacaccgtcgaggtgaacgagggtgaggtggtgctcgacatcatccaccggctgcag
gccacccaggcaccggatctggcggtgcgctggaactgcaaggcgggcaagtgcggttcg
tgctcggcggagatcaacggccgcccgcgcctgctgtgcatgacccggatgtcggtgttc
gccgaggacgaggtcatcacggtgaccccgatgcggaccttcccggtgatccgggacctg
gtcaccgacgtgtccttcaactacaccaaggcgcgtgagatcccgtcgttcaccccgccc
gcggacctcaagcccggcgactaccgcatgcagcaggtggacgtcgaacgctcgcaggag
ttccgcaagtgcatcgagtgcttcctgtgccagaacacctgccacgtggtgcgtgaccac
gaggagaacaaggaagccttcgccgggccgcggtacctgatgcggatcgcggagctggag
atgcacccgctggacgtggccgaccgccgggacgccgcgcaggacgagcacgggctcggg
tactgcaacatcaccaagtgctgcaccgaggtctgcccggaaggcatccacatcaccgac
aacgcgctgatcccgatgaaggagcgcgtggccgaccgcaagtacgacccgatcgtctgg
ctgggcaacaaactgttccgccggggcacctcagaccgcccctga
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