Amycolatopsis sp. YIM 10: YIM_35765
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Entry
YIM_35765 CDS
T06270
Symbol
rimO2
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amyy03009
]
YIM_35765 (rimO2)
Enzymes [BR:
amyy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
YIM_35765 (rimO2)
Ribosome biogenesis [BR:
amyy03009
]
Prokaryotic type
ribosomal protein modification factors
YIM_35765 (rimO2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QFU92312
UniProt:
A0A5P9PW09
LinkDB
All DBs
Position
complement(7545439..7546878)
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AA seq
479 aa
AA seq
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MPSSTTNASSSPRRVSLLTLGCARNEVDSEELAGRLAAGGWELAEEPEGSDVIVVNTCGF
VEQAKKDSVDTLLAAADTGAKVVAVGCMAERYGAELAESLPEADAVLGFDHYPDLAERLG
DIVSGHAVPSHVPADRRNLLPISPVQRPAAAQEVALPGHAQEGWGPRVLRTRLDDSPVAA
LKIASGCDRRCSFCAIPSFRGSFVSRRPDELVAEARWLAEQGVKELFLVSENSTSYGKDF
GREFGGTRALELLLPQLAEIDGIERVRVSYLQPAETRPGLVQAIATTPGVATYFDLSFQH
SSETVLRRMRRFGSTDSFLALIEQIREYAPDAGIRTNVIVGFPGETEADVAELERFLIGA
RMDAVGVFGYSDEDGTEAEGFDGKLDEETVAKRVARISALVEELTTQRAEERVGDFVDVL
IESVEDGEVTGRAAHQAPEVDGECVLVDAGEREVGEFVRCEVTDSAGVDLIVRPAGADR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcttccaccacgaacgcttcgtccagcccgcggcgggtctcgctgctgaccctc
gggtgcgcccgcaacgaggtcgactccgaggagctggccggccggctggcggccggcggc
tgggagctggccgaggagccggagggctccgacgtgatcgtggtgaacacctgcggcttc
gtcgagcaggccaaaaaggactcggtggacaccctgctggccgccgccgacaccggcgcg
aaggtggtcgcggtcggctgcatggccgagcggtacggcgcggagctggccgagagcctg
cccgaggccgacgccgtgctcggcttcgaccactaccccgacctggccgagcggctcggc
gacatcgtctccggccacgccgtgccctcgcacgtgcccgccgaccgccgcaacctgctg
ccgatcagcccggtccagcgcccggccgcggcacaggaggtggcactgcccggccacgcg
caggagggctggggcccgcgtgtgctgcgcacccggctggacgactcgccggtggccgcg
ctgaagatcgcctccggctgcgaccgccgctgctcgttctgcgccatcccgtccttccgc
ggctcgttcgtctcccgccgcccggacgagctggtcgccgaggcgcgctggctggccgag
cagggcgtcaaggaactgttcctggtcagtgagaactccacctcgtacggcaaggacttc
ggccgcgagttcggcggcaccagggcgctggagctgctgctgccgcaactggccgagatc
gacggcatcgagcgcgtgcgcgtgtcgtacctccagcccgccgagacccggccgggcctg
gtgcaggcgatcgccaccacgccgggcgtcgccacctacttcgacctgtccttccagcac
tccagcgagaccgtgctgcgccggatgcgccggttcggctccaccgactcgttcctcgcg
ctgatcgagcagatccgcgagtacgcgccggacgcgggcatccgcaccaacgtgatcgtc
ggcttccccggcgagaccgaggccgacgtggcggagctggagcggttcctgatcggcgcg
cggatggacgcggtcggcgtgttcggttactccgacgaggacggcaccgaggccgagggc
ttcgacggcaagctcgacgaggagaccgtggccaagcgggtcgcgcgcatctcggcgctg
gtcgaggagctgaccacgcagcgggccgaagagcgggtcggcgacttcgtggacgtgctg
atcgagtcggtcgaagacggtgaggtcaccggccgcgccgcgcaccaggcgcccgaggtc
gacggcgagtgcgtgctcgtcgacgccggtgagcgcgaggtcggggagttcgtgcgctgc
gaggtgaccgactccgccggagtggacctgatcgtgcgtccggcgggcgcggaccggtga
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