Amycolatopsis mediterranei RB: B737_2608
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Entry
B737_2608 CDS
T02804
Name
(GenBank) UreA amidolyase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00220
Arginine biosynthesis
amz00791
Atrazine degradation
amz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
B737_2608
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
B737_2608
Enzymes [BR:
amz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
B737_2608
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
HlyD_3
Biotin_lipoyl_2
LAL_C2
GCV_H
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AGT83272
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Position
complement(2829329..2832877)
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AA seq
1182 aa
AA seq
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MRLLVANRGEIAVRILRSAKELGLETVAVHSDADRLAPHVRLADRAVRLGPAPAAESYLR
AGAIIAVALDTSCDAIHPGYGFLSEDAAFARACEDAGIAFAGPAPEHLEVFGSKHTAREA
AIAAGVPLLAGTGLLSDVDDALARAEDIGYPVMLKATGGGGGIGMRACASPDELRAAWDT
VRSVAAKSFASSGVFLERLVTRARHVEVQVFGDGFGEVLALGTRDCSLQRRNQKVVEECP
APDLPEDVRKHLVESAVALCSSVRYRSAGTVEYVYDPERGEAAFLEVNTRLQVEHPVTEA
VYGVDLVAWMLRLAQGDRAMFRAVPVARGHAVEARVYAEDPGAGHRPSAGLVTRVTLPAD
TRVDTWVEPGTTVTTHYDPLLAKVICTGADRAEALANLREALAATRFDGVQTNLGQLRAA
ATDPAFGAAAHDTSTLDSVGDAEPRIDVVRGGTMTTVQDWPGRTGFWHVGVPPSGPMDDL
SLRLGNLALGNPEGAPGLECTVDGVALRFSRATEVCVTGAPTTVLVDGTEVSLWTPVEVP
AGATLDVRSCTAGLRSYLLVRGGVDVPEFLGSAATFTLGKFGGHGGRALAAGDVLRPGPA
PADPVVGPVPTADRPEFASHWTIGALEGPHAAPEFFTPDDVDTFYATDWQVHFNSARTGV
RLVGPRPKWARPDGGEAGLHPSNIHDTPYAIGAVDYTGDLPILLGPDGPSLGGFVCPATV
ATGERWKLGQLRPGDTVRFVPIGTDHAAALRTRPASAVEPSRPARDDGGVLARLSSSDCT
ESSGEPSVTYRRSGDDNLLVEYGEMKLDLALRMRVHALAERLAAEGVPGIVDLTPGIRSL
QVHVDPDALPVGKALGLVRELERDLPPTHDLVVPSRSVRLPLSWDDPATREAIERYMTGV
RDDAPWCPWNIEFIRRVNGLSSVDEVYRTVFDAEYLVLGLGDVYLGAPVATPLDPRHRLV
TTKYNPARTWTAENSVGIGGAYLCIYGMEGPGGYQFVGRTVQVWNSWRGGDRPWNLRFFD
RISWYPVSAEELLDLRAQSASGTLDLDTTEGSFALADYQKFLAENAESIAGFRATQAAAF
EAERQAWAAAGEFDPKPEPVTRPPARVEAPPGGHVVEAPFAATVWRVDVTAGERVEDAQS
LVTLEAMKTEARIPAPASGEVVEVLVSPGDQVAPGTPLVVLA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgctcgtcgccaaccgcggcgagatcgcggtccggatcctgcgcagcgccaag
gaactgggtctcgaaacggtcgcggtgcattccgacgccgatcgcctcgccccgcacgtg
cggctcgccgaccgggccgtccggctcggcccggcgcccgcggcggaaagctacctgcgg
gccggcgcgatcatcgccgtggcgctggacaccagctgcgacgcgatccaccccgggtac
ggcttcctctcggaggacgccgcgttcgcacgcgcctgcgaagacgccgggatcgcgttc
gccgggccggccccggagcacctggaggtgttcggcagcaagcacaccgcgcgcgaggcg
gcgatcgcggcgggcgtgccgctgctggccggcaccggcctgctgtccgatgtggacgat
gcgctggcccgcgccgaggacatcggctacccggtgatgctcaaggcgaccggcggcggg
ggcgggatcgggatgcgcgcctgcgcatcgccggacgagctgcgcgccgcctgggacacc
gtgcgcagcgtcgcggccaagagcttcgccagctccggcgtgttcctcgaacgcctggtg
acccgcgcgcggcacgtcgaggtccaggtgttcggcgacggcttcggcgaggtgctggcc
ctgggcacgcgcgactgctcgctgcagcggcgcaaccagaaggtcgtcgaggagtgcccg
gcaccggacctgcccgaggacgtccggaagcacctggtggagtccgcggtcgcgctgtgc
tcgtcggtgcggtaccgctccgcgggcaccgtcgaatacgtttacgaccccgaacgcggc
gaggcggcgttcctcgaggtcaacacgcggctgcaggtcgagcacccggtcaccgaggcg
gtctacggcgtcgacctggtcgcctggatgctgcggctcgcccagggcgaccgcgcgatg
ttccgggcggtcccggtcgcccgcgggcacgccgtcgaagcgcgcgtgtacgccgaggac
ccgggcgccgggcaccggccgagcgcgggtctcgtcacccgggtcacgctgcccgcggac
acccgcgtcgacacctgggtcgagccgggcaccaccgtcaccacgcactacgacccgttg
ctggccaaggtgatctgcaccggcgccgaccgcgccgaggcgctggcgaacctgcgggaa
gcgctcgccgcgacccggttcgacggggtgcagaccaacctgggccagctgcgggcggcg
gccaccgacccggccttcggcgccgcggcgcacgacacgtccactttggacagcgtcgga
gacgcggagccgcggatcgacgtggtccgcggcgggaccatgacgaccgtgcaggactgg
ccgggccgcaccgggttctggcacgtcggggtgccgccgagcggcccgatggacgacctc
tcgctgcggctgggcaacctggcgctgggcaaccccgaaggcgcgcccggcctggagtgc
actgtggacggggtggcgctgcggttttcccgtgccaccgaagtctgcgtcaccggggcg
ccgacgacggtcctcgtcgacggcaccgaggtttccctgtggacaccggtcgaagtcccc
gcgggagcgacgctcgacgtccggtcctgcacggccgggctgcgcagctacctcctggtg
cgcggcggcgtcgacgtgccggagttcctcggcagcgcggcgacgttcacgctggggaag
ttcggcggccacggcggccgcgcgctggccgccggggacgtcctgcgccccggtccggcc
cccgcggacccggtcgtgggcccggtgccgaccgccgaccggccggagttcgcttcccac
tggacgatcggcgcgctcgaaggaccgcacgcggccccggagttcttcaccccggacgac
gtcgacacgttctacgccacggactggcaggtgcacttcaactcggcgcgcaccggcgtc
cggctcgtcgggccgcggccgaagtgggcacggccggacggcggcgaggcgggcctgcac
ccgtcgaacatccacgacacgccgtacgcgatcggtgccgtcgactacaccggcgacctg
ccgatcctgctcggcccggacgggcccagcctgggcgggttcgtctgcccggcgacggtc
gccaccggcgagcggtggaagctcgggcagctgcggccgggcgacaccgtgcggttcgtg
ccgatcggcaccgaccacgcggcggcgctgcggacgcggccggcgtcggcggtcgagccg
agccgccccgcgcgcgacgacggcggtgtcctcgcgcgactgtcctcttcggactgtacg
gaatcttcgggcgagccgtcggtcacctaccgccgcagcggcgacgacaacctgctcgtc
gagtacggcgagatgaagctcgacctggcgctgcggatgcgggtgcacgcgctggccgag
cgcctggcggccgaaggcgtaccggggatcgtggacctcacgccgggcatccggtcgctg
caggtgcacgtcgacccggacgcgctgccggtcggcaaggcgctcgggctggtgcgcgaa
ctggagcgggacctcccgccgacgcacgacctggtggtgccgagccgcagcgtccggttg
ccgctgtcgtgggacgaccccgccacgcgcgaggcgatcgagcggtacatgaccggcgtg
cgcgacgacgcgccgtggtgcccgtggaacatcgagttcatccggcgcgtcaacgggctg
tccagtgtggacgaggtgtaccggacggtgttcgacgcggagtacctcgtgctcggcctc
ggcgacgtctacctcggcgcgccggtggcgacgccgctggacccgcgccaccgcctggtc
acgacgaagtacaacccggcgcggacgtggacggcggagaactccgtcggcatcggcggc
gcctacctgtgcatctacggcatggagggcccgggcggctaccagttcgtcgggcggacc
gtccaggtgtggaacagctggcgcggcggggaccggccgtggaacctgcggttcttcgac
cggatctcctggtacccggtgtcggccgaagagctgctggacctgcgggcgcagagcgcg
tccggcacgctggacctcgacaccaccgagggctccttcgccctggcggactaccagaag
ttcctcgcggagaacgccgagagcatcgcgggcttccgggccacgcaggcggcggcgttc
gaagcggaacggcaggcgtgggccgcggcgggcgagttcgacccgaaaccggagccggtc
acccggccgccggcgcgggtcgaggcgccgccgggcgggcacgtcgtggaggcgccgttc
gcggcgacggtgtggcgggtcgacgtcaccgcgggcgagcgcgtcgaggacgcgcagtcc
ctggtgacgctggaagcgatgaagacggaggcgcggatcccggcgccggcgagcggtgag
gtggtcgaagtgctcgtgtcccccggcgatcaggtggcgcccggaacaccgctggtggtg
ctggcatga
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