Ancylobacter sp. TS-1: GBB76_13200
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Entry
GBB76_13200 CDS
T06239
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
anc
Ancylobacter sp. TS-1
Pathway
anc03030
DNA replication
anc03410
Base excision repair
anc03420
Nucleotide excision repair
anc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBB76_13200 (polA)
03410 Base excision repair
GBB76_13200 (polA)
03420 Nucleotide excision repair
GBB76_13200 (polA)
03440 Homologous recombination
GBB76_13200 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anc03032
]
GBB76_13200 (polA)
03400 DNA repair and recombination proteins [BR:
anc03400
]
GBB76_13200 (polA)
Enzymes [BR:
anc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBB76_13200 (polA)
DNA replication proteins [BR:
anc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GBB76_13200 (polA)
DNA repair and recombination proteins [BR:
anc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GBB76_13200 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GBB76_13200 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QFR33994
UniProt:
A0A5P8N168
LinkDB
All DBs
Position
complement(2812204..2815209)
Genome browser
AA seq
1001 aa
AA seq
DB search
MPANDPHHDTVDAGDHVVLIDGSAYIFRAYHALPPLTRSSDRLPVGAVAGFCNMLWKLVR
AGQNGGGFEPKPTHLAVVFDKSEQTFRKDIYPLYKAQRPELPEDLRPQFPLIREATRAFD
LACVEQAGFEADDLIATYAEQAKAKGARVTVISSDKDLMQLVDERVRMYDPMKDKAIGTE
EVFEKFGVAPDKVVDVQSLAGDSVDNVPGVPGIGIKTAAQLLAEYGDLDTLLARASEIKQ
TKRRENLIEFADQARLSRQLVTLKRDVALDVPLDDIAVVEPEGRKLIAFLKAMEFTTLTR
RVGEAYEIEIAAIEPDPALKAGASPSPQWGEGRGEGELGGTQAADGSTNATPLTPALSPS
GRGSDADALTPLALSAARQAQATATPVDRSAYETVTTLARLKEWIARAVDLGVVAVDTET
TGLDPMQADIVGFSLALAPNEACYVPLTHKGGDEGLFSEGMLPGQIPLAEAVAALKPLLE
DPSVLKIGQNLKYDWLVFDRLGIELVGYDDTMLLSYVLDAGASPHGMDPLSVRWLGHTPI
KFEEVCGKGKGQISFDRAAIDKASEYAAEDADVTLRLWRVLKPRLAAEGKATVYETLERP
LVAVLAKMEARGIRIDRQMLSRLSGEFAQGMGRLEAEISDMAGESFNPGSPKQLGDILFG
KMQIPGGRKTPTGAWSTGADVLEELAEQGHELPRRILDWRQLQKLKSTYTDALPSYVHPE
TGRVHTSFALAATTTGRLSSSEPNLQNIPVRSEEGRKIRKAFIAAPGHKLISADYSQIEL
RLLAEIADTPSLRQAFQDGLDIHAMTASEMFGVPIEGMPGEVRRRAKAINFGIIYGISAF
GLANQLSIPREEAGAYIKRYFERFPGIRAYMDETRNFAREHGYVETLFGRRCHYPDIAAK
NPSIRAFNERAAINARLQGSAADIIRRAMARMDGALEKARLSARMLLQVHDELIFEVPDE
EVDATIPVVREVMELAPFPAVALKVPLKVDARAAENWDEAH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgaacgacccccatcacgacaccgtggatgccggcgaccatgtcgtcctgatc
gacggctcggcctatatcttccgcgcctaccacgcgctgcccccgctcacccgctcctcc
gacaggctgccggtcggggcggtggcgggattctgcaacatgctgtggaagctggtacgc
gccgggcagaacgggggcggtttcgagcccaagcccacccatctcgccgtggtgttcgac
aagtccgagcagactttccgcaaggacatctacccgctctacaaggcgcagcgcccggag
ctgccggaagatctgcgcccgcagtttcccctcatccgggaagcgactcgcgcgttcgac
ctcgcctgcgtcgagcaggccggcttcgaggccgacgacctcatcgccacctatgccgag
caggccaaggccaagggcgcccgcgtcaccgtcatctcctccgacaaggacctgatgcag
ctcgtcgacgagcgggtgcgcatgtacgacccgatgaaggacaaggcgatcggcacggaa
gaggtgttcgagaagttcggcgtcgcccccgacaaggtggtcgacgtgcagtcgctggcc
ggcgattcggtggacaatgtgccgggcgtgccgggcatcggcatcaagaccgccgcccag
cttctggccgaatatggcgacctcgacacgctgctggcccgcgcctccgagatcaagcag
accaaaaggcgcgagaatctgatcgagttcgccgatcaggcccgcctgtcgcgccagctc
gtcacgctcaagcgcgacgtggcgctcgacgtgccgctcgacgacatcgccgtggtcgag
ccggaagggcgcaagctgatcgccttcctcaaggcgatggagttcaccacgctgacccgc
cgcgtcggcgaggcctatgagatcgagatcgccgccatcgaacccgatccggcgctgaag
gcgggagcctccccctctccccagtggggagagggtcggggtgagggggagcttggcggc
acgcaagccgccgacgggtccaccaacgcaacgcccctcaccccagccctctccccgtcg
gggagagggagcgacgcggacgccctcaccccgctcgccctttccgccgcccggcaggcg
caggccaccgcgacgccggtagaccgttccgcctacgaaacggttacgactctggcccga
ctcaaggaatggatcgcccgcgccgtcgaccttggcgtggtggcggtcgacaccgagacc
accggcctcgacccgatgcaggcggatatcgtcggcttctcgctggcgctggcgccgaac
gaggcgtgctacgtgccgctcacccacaagggcggcgacgagggcctgttcagcgagggg
atgctgcccggccagattccgctcgccgaggcggtggccgcgctcaagccgcttctggaa
gacccgtccgtcctgaagatcggccagaacctcaaatatgactggctggtgttcgatcgc
ctcggcatcgagctggtcggctatgacgacacgatgctgctctcctatgtgctggacgcc
ggcgcctcgccgcacggcatggacccgctctcggtccgctggctcggccataccccgatc
aagttcgaggaggtgtgcggcaagggcaaggggcagatctcgttcgaccgcgccgccatc
gacaaggccagcgaatacgccgccgaggacgccgacgtcacgctgcggctgtggcgcgtg
ctcaagccccggctggccgccgaaggcaaggccaccgtctacgagacgctggagcgcccg
ctcgtcgccgtgctggcaaagatggaggcgcgcggcatccgcatcgaccggcagatgctc
tcgcggctctcgggcgagttcgctcaagggatgggccggctggaggcggaaatctccgac
atggcgggggagagcttcaaccccggctcgcccaagcagctcggcgacatattgttcggc
aagatgcagattcccggtgggcgcaagacaccgacgggggcgtggtcgaccggcgccgac
gtgctggaggaactcgccgagcaggggcacgaactgccccgccgcatcctcgactggcga
cagctgcagaagctgaaatcgacctataccgacgcactgccctcctatgtccaccccgag
accgggcgcgtgcacacctccttcgcgctggcggcgaccaccacgggccggctctcctcc
tccgagccgaaccttcagaacatcccggtgcgcagcgaggaaggccgcaagatccgcaag
gccttcatcgccgcgcccggccacaagctgatctcggccgactattcgcagatcgagctg
cgcctgctggccgagatcgccgacacgccctcgctgcggcaggccttccaggacgggctc
gacatccacgcgatgacggcctcggagatgttcggcgtgccgatcgagggcatgccgggc
gaggtgcgccggcgcgccaaggcgatcaatttcggcatcatctacggcatctcggccttc
gggctggccaaccagctgtcgattccgcgcgaggaggccggcgcctacatcaagcgctat
ttcgagcgcttccccggcatccgcgcctatatggacgagacgcgcaactttgcccgcgag
cacggctatgtggagacgctgttcggccggcgctgtcactaccccgacatagcggccaag
aacccgtccatccgcgccttcaacgagcgcgcggcgatcaatgcccgcctccagggctcg
gccgccgacatcatccgccgtgccatggcgcgcatggacggggcgctggaaaaagccagg
ctctccgcccgcatgctgctgcaggtgcatgacgagctgatcttcgaagtgccggacgag
gaggtcgacgccaccatccccgtcgtacgcgaggtgatggagctggcccccttccccgcc
gtggcgctgaaagtcccgctcaaggtcgacgcccgcgcggcggaaaactgggacgaggcg
cattga
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