Aspergillus nidulans: ANIA_00161
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Entry
ANIA_00161 CDS
T01016
Name
(RefSeq) cleavage polyadenylation factor subunit CLP1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ani
Aspergillus nidulans
Pathway
ani03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ANIA_00161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ani03019
]
ANIA_00161
Enzymes [BR:
ani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
ANIA_00161
Messenger RNA biogenesis [BR:
ani03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
ANIA_00161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
ATP_bind_1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
2875940
NCBI-ProteinID:
XP_050469311
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Position
VIII:4355289..4357223
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AA seq
546 aa
AA seq
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MSLPGLELTQPSAESQSASAPPTQINLSAGSEWRFEVAFGTTVRVKLLTGTAELFGTELA
PSQTYTFSGTKAAIYTWHGCTLEVSAGDAVSGLDGTTSASGRGGLGAGGCQSEYIAEETP
MVEYANVHFALEGLRAEAKASGRDGPRVLILGPEDAGKTSLSKILTAYAVKVGREPIVVN
LDPTEGMLSVPGTVSATAFRAMLDVEEGWGSSPMSGPSAVPVKLPLVYFYPIVNPLEAEG
SVFRPIVSRLALSVMGRMAEDEDAKETGIIVDTPGILSQSRAGALEMINHIVTEFSITTI
LVIGSERLYSLMMKSYDNKPSSSASSAASDERISVVKLSKSGGCVDRDAAFMKAVRESQI
RTYFFGNPVPTTASSALSISSSSTTNVTLSPHAQQLDFDAIALYNYTTSSAEEDQNDEDD
YDPAQLTTDSFLPGNNEAESASSLPGLNSAANASAAAAAGALVPLKKVPGPAPSALANTL
LAITHASPTSSPSEIRDASTMGFLYVADVDSERGKIRVLAPVGGRVPSRAIIWGKKWPAE
VVGLVG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccctggtttagagctcacgcagccctccgcggagagccagtccgcttccgca
ccgccaactcagattaatctctccgcaggttcagagtggaggttcgaggtagccttcggg
accaccgttcgagttaagctcctaaccggcaccgcagagctcttcggcaccgaactcgcc
ccctcacaaacctacacgttctccggtacaaaggccgcaatttacacgtggcacggctgc
accctcgaagtgagcgccggtgacgcagtctccggactcgatgggactacatctgcctcc
ggccgaggcgggctcggagcaggaggctgccagagcgaatatatcgcagaggaaacgccg
atggtagaatatgcaaatgttcactttgcactggagggcctccgtgctgaagcgaaggcg
agtgggagggacggaccccgcgtactgatccttggccccgaggatgcggggaagacgagc
ttgtcaaagatcctgacggcctatgcggtaaaggttggacgcgagccgattgtggtcaat
ttggacccgactgaggggatgttgagcgtgcctggtacagtgtcggcgacggcgtttcgg
gctatgctggacgttgaggaagggtgggggagtagccctatgtctgggccgagtgcggtg
ccggtgaagttgccgttggtgtatttctatccgatagtcaacccgttggaggcggaaggg
tcggtgttcaggccgattgtgtcgaggttggcgttgtcggttatgggaaggatggcagaa
gatgaggatgcgaaagaaacgggcattatcgttgatacgccggggattctaagccagagt
cgggcgggggctttggagatgattaaccatattgtgactgaattttcgattacgacgatt
ctggttataggctcggaacggttgtacagtcttatgatgaaaagctacgataataagcca
tcgtcaagtgcatcttctgcggcatcagatgagcgtatctcggtagtgaagctctcaaaa
tccggtgggtgcgttgatcgtgacgctgcgtttatgaaggcagtgcgcgagtcccagatt
cgaacatacttcttcggcaacccggtccctaccacggcttcatcggcattgtctatatcc
tcctcttcaacaacaaatgttacactatcgccacacgcacagcagctagactttgacgct
atagccctctacaactacaccacctcgtcggcagaggaggaccaaaacgacgaggacgac
tatgatcccgcccaattgacgacggactccttcctcccgggaaacaacgaggcagagagc
gcatcctctcttcccggcctcaattcggcagccaatgccagcgccgctgccgccgctggc
gcactcgtgccgctgaaaaaggtcccgggccctgcgccctctgcactggccaacactctt
cttgctattacgcatgcctctcccaccagcagcccatctgagatccgggacgcgagcacc
atggggttcctttacgtcgctgacgtcgatagcgaacgtgggaagatcagggtccttgcg
ccggtggggggccgggttccctcacgagcgatcatctggggtaagaaatggccggcggaa
gttgtagggctggtagggtag
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