Aminobacter niigataensis: AMD1_4935
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Entry
AMD1_4935 CDS
T09606
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AMD1_4935 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
anj01007
]
AMD1_4935 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anj03016
]
AMD1_4935 (lysS)
Enzymes [BR:
anj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
AMD1_4935 (lysS)
Amino acid related enzymes [BR:
anj01007
]
Aminoacyl-tRNA synthetase
Class I (A)
AMD1_4935 (lysS)
Transfer RNA biogenesis [BR:
anj03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AMD1_4935 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
tRNA-synt_1
tRNA-synt_1e
tRNA-synt_1c
Motif
Other DBs
NCBI-ProteinID:
CAI2936209
LinkDB
All DBs
Position
AMD1:4737643..4739340
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AA seq
565 aa
AA seq
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MAVFGGISAQIKRALDMTRSNSIDLNPEILAAAAESKAWPFEEAKKIVERYKKTGLPETV
LFETGYGPSGLPHIGTFGEVARTTMVRHAFHVLTENKVKTRLLCFSDDMDGMRKIPENVP
DRAFLEPHLHKPLTAVPNPFGGDYASFGDHNNAMLRRFLDTFGFDYEFASATEYYRAGKF
DAMLLRAVERYDQIMAVMLPTLGEERQATYSPFLPISPKSGRVLYVPMKHVDAKAGTITF
DDEGTETTLSVTGGKVKLQWKPDFGMRWAALNVDFEMFGKDHQTNAVIYDRICNLLGGRA
PEHFVYELFLDENGQKISKSKGNGLTIDEWLTYAPTESLGLYMYQRPRQAKKLYFDVIPK
AVDEYYSFLSAYPRQAWKERLGNPVWHMHSGNPPVVDMPVPFSMLLNLVSASNAHDKGVL
WGFISRHAPGVTPETHPELDKLTGYAVRYFDDFVKPTKTFRAADDVERAALEALEKALGA
LPAGADGEAIQNASLNVARQIERYQDHTKQSPEGGPGVSGAFFQMIYQVLIGQERGPRFG
SFAALYGIAETRALIRSALEGKLAA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcttcggcggaatttccgcccaaataaaaagggctctcgacatgacgagatca
aactcaatagatctcaacccggaaatcctcgcggcggctgccgaaagcaaagcctggccg
ttcgaggaagccaagaaaatcgtcgagcgctacaagaaaaccggccttcccgagaccgtc
ctgttcgagaccggctacggcccttcgggcctgccgcatatcggcacgttcggcgaggta
gcgcgcaccacgatggtacgccatgcctttcatgtgctgaccgaaaacaaggtcaagacc
aggctcctgtgcttctccgacgacatggacggcatgcgcaagatcccggagaacgtgccg
gaccgcgccttcctcgagccgcacctgcacaagccgctgactgccgtgcccaacccgttc
ggcggcgactatgccagcttcggcgatcacaacaacgcgatgctgcgccgcttcctcgac
accttcggcttcgactacgagttcgccagcgcgaccgagtattacagggcaggcaagttc
gacgcgatgctgctgcgggccgtcgagcgctacgaccagatcatggccgtgatgctgccg
acgctcggcgaggagcgccaggcgacctatagcccgttcctgccgatctcgccgaagagc
ggccgcgtgctctacgtgccgatgaagcacgtcgacgccaaggccggcacgatcaccttc
gacgacgaaggcaccgaaaccacgctgtcggtcaccggcggcaaggtcaagctgcagtgg
aagccggatttcggcatgcgctgggcagccctcaacgtcgatttcgagatgttcggcaag
gatcaccagaccaatgcggtgatctacgaccgcatctgcaacctgctcggcggacgggcg
ccggagcatttcgtctacgagctgttcctcgacgagaacggccagaagatctccaagtcg
aagggcaacgggctgaccattgacgaatggctgacctacgcgccgaccgaaagcctcggc
ctctacatgtaccagcggccgcgccaggccaagaagctctatttcgacgtcatcccgaag
gcggtggacgagtactacagcttcctctccgcctacccccggcaggcatggaaggaacgc
ctgggcaatccggtctggcacatgcattcgggcaatccgcccgtcgtcgacatgccggtg
ccgttctcgatgctgctcaacctcgtcagcgcctccaacgcgcacgacaagggcgtattg
tggggcttcatctcgcgccatgcgcccggcgtgacgcctgagacgcatccggaactcgac
aagctgaccggctatgccgtccgttacttcgacgatttcgtgaagccgacgaagaccttc
agggcggccgacgacgtcgaacgtgcggcactggaagcgctggagaaggcactcggcgcg
ctgccggctggtgccgacggcgaagccatccagaacgcctcgctcaatgtcgcacgccag
atcgagcgctaccaggaccacaccaagcagagcccggaaggcggccccggcgtatccggc
gccttcttccagatgatctaccaggttctgatcggccaggagcgcggcccgcgcttcggc
tccttcgcagcgctttacggcatcgccgagacccgggcgctgatccgcagcgcgctggaa
ggcaagctggcagcgtag
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