Arvicanthis niloticus (African grass rat): 117710141
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Entry
117710141 CDS
T08817
Symbol
Grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04014
Ras signaling pathway
anu04015
Rap1 signaling pathway
anu04020
Calcium signaling pathway
anu04024
cAMP signaling pathway
anu04080
Neuroactive ligand-receptor interaction
anu04713
Circadian entrainment
anu04720
Long-term potentiation
anu04724
Glutamatergic synapse
anu05010
Alzheimer disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05030
Cocaine addiction
anu05031
Amphetamine addiction
anu05033
Nicotine addiction
anu05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
117710141 (Grin1)
04015 Rap1 signaling pathway
117710141 (Grin1)
04020 Calcium signaling pathway
117710141 (Grin1)
04024 cAMP signaling pathway
117710141 (Grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117710141 (Grin1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
117710141 (Grin1)
04720 Long-term potentiation
117710141 (Grin1)
09159 Environmental adaptation
04713 Circadian entrainment
117710141 (Grin1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117710141 (Grin1)
05014 Amyotrophic lateral sclerosis
117710141 (Grin1)
05016 Huntington disease
117710141 (Grin1)
05017 Spinocerebellar ataxia
117710141 (Grin1)
05020 Prion disease
117710141 (Grin1)
05022 Pathways of neurodegeneration - multiple diseases
117710141 (Grin1)
09165 Substance dependence
05030 Cocaine addiction
117710141 (Grin1)
05031 Amphetamine addiction
117710141 (Grin1)
05033 Nicotine addiction
117710141 (Grin1)
05034 Alcoholism
117710141 (Grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
anu04040
]
117710141 (Grin1)
Ion channels [BR:
anu04040
]
Ligand-gated channels
Glutamate (ionotropic)
117710141 (Grin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
117710141
NCBI-ProteinID:
XP_034360672
EnsemblRapid:
ENSANLG00005011622
LinkDB
All DBs
Position
6:complement(106015009..106041401)
Genome browser
AA seq
959 aa
AA seq
DB search
MSTMHLLTFALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSARHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAIEREEGQLQLCSRHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcacctgctgacattcgccctgcttttctcctgttccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcgcaagcacgagcag
atgttccgcgaggcagtaaaccaggccaataagcgacacggctcttggaagatacagctc
aacgccacttctgtcacccataagccaaacgccatacagatggccctgtcagtgtgtgag
gacctcatctccagccaggtctacgctatcctagttagtcacccgcctactcccaacgac
cacttcactcccacccctgtctcctacacagctggcttctacagaatccccgtcctgggt
ctgactacccgaatgtccatctactctgacaagagcatccacctgagcttcctgcgcact
gtgccaccctactcccatcagtccagtgtctggtttgagatgatgcgagtctacaactgg
aaccatatcatcctgctggtcagcgatgaccacgagggccgggcagcgcagaagcgtctg
gagacgttgctggaggagcgtgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgacaacaagcgcggacccaaggcggagaaggtgctgcagtttgaccca
ggaactaagaatgtgacagctctactgatggaggcccgggaactggaggcccgggtcatc
atcctctctgcaagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgaccggctctgggtacgtgtggctggttggggagcgcgagatctctgggaacgccctg
cgctacgctcctgacggcatcatcggacttcagctcatcaacggcaagaatgagtcggcc
cacatcagtgacgccgtgggcgtggtggcacaggcagttcacgagctcctagagaaggag
aacatcactgaccctccgcggggttgcgtgggaaacaccaacatctggaagacaggacca
ctgttcaagagggtgctgatgtcttctaagtatgcggatggggtcactggccgtgtggaa
ttcaatgaggatggggaccgaaagtttgccaactatagtatcatgaacttgcagaaccgc
aagctggtgcaagtgggcatctacaatggtacccatgtcatcccaaatgacaggaagatc
atctggccaggaggagagaccgagaagcctcgaggataccagatgtccaccagactaaag
atagtgacaatccaccaagagcccttcgtgtatgtcaagcccacaatgagtgatgggaca
tgcaaagaggagttcacagtcaatggtgacccagtcaagaaggtgatctgcacggggcct
aatgacacgtccccaggaagtgcacgccacacagtgccccagtgctgctatggcttctgc
attgacctgctcatcaagctggcccggaccatgaattttacctatgaggtgcacctggtg
gcagatggcaagtttggcacacaggagcgggtaaacaacagcaacaaaaaggagtggaac
ggaatgatgggagagctactcagcggtcaagcagacatgattgtggcgccgctgaccatc
aacaatgagcgtgcgcagtacatagagttctccaagccattcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacactggactcatttatgcagcctttccag
agcacactgtggctgctggtggggctgtctgttcatgtggtggctgtgatgctgtacctg
ctggaccgcttcagtccctttggccgatttaaggtgaacagtgaggaggaggaggaggat
gccctgaccctgtcttctgccatgtggttctcctggggtgtcctgctcaactctggcatt
ggggaaggtgccccccggagtttctctgcacgtatcctaggcatggtgtgggctggtttt
gccatgatcatcgtggcttcctacactgccaacctggcagccttcctggtgctggatcgg
cctgaggagcgcatcacaggcatcaatgaccctaggctcagaaacccctcagacaagttc
atctatgcaactgtaaaacagagctctgtggacatctacttcaggaggcaggtggagttg
agcaccatgtaccggcacatggagaaacacaattacgagagtgcagctgaggccatccag
gctgtgcgggacaacaagctccatgccttcatctgggactcagctgtgctggagtttgag
gcttcacagaagtgtgatctggtgaccacgggtgagctgttcttccgctcaggctttggc
atcggcatgcgcaaggacagcccctggaagcagaatgtttccctgtccatactcaagtcc
catgagaatggcttcatggaagatctggataagacatgggttcggtatcaggaatgtgac
tcccgaagcaatgctcctgcaaccctcacttttgagaacatggcaggggtcttcatgctg
gtggctggaggcatcgtagctggaattttcctcattttcattgagatcgcctacaagcga
cataaggatgcccgtaggaagcagatgcagctcgcttttgcagccgtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctattgagagggaggagggccagctgcagctgtgttcccgtcatagggagagctga
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