Arvicanthis niloticus (African grass rat): 117710841
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Entry
117710841 CDS
T08817
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04721
Synaptic vesicle cycle
anu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
117710841 (Slc6a4)
04721 Synaptic vesicle cycle
117710841 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117710841 (Slc6a4)
Transporters [BR:
anu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117710841 (Slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
117710841
NCBI-ProteinID:
XP_034361988
EnsemblRapid:
ENSANLG00005005869
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All DBs
Position
6:complement(44807791..44828550)
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AA seq
630 aa
AA seq
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METTPLNSQKVLSECKDREDCQENGVLQKGVPMPADRAEPGQISNGYSAVPSTSAGDEAP
HSMPAATTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTII
AWALYYLISSFTDQLPWTSCENSWNTGNCTNYFAQDNITWTLHSTSPAEEFYLRHVLQIH
QSKGLQDLGTISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGA
TLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCILGSLLT
LTAGGAYVVTLLEEYATGPAVLTVALIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRIC
WVVISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGTSSVICIPTYIVYRLIST
PGTLKERIVKGITPETPTEIPCGDIRMNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaagtgctgtcagagtgcaaggacagagaggac
tgtcaagaaaatggcgttcttcagaagggtgtccctatgccagcagacagggcagagcct
ggccaaatatccaatgggtactctgcagttcccagcacaagtgctggggacgaagctcca
cactctatgccagctgccaccaccaccctggtagctgagattcgccaaggggaacgggag
acctggggcaagaagatggatttcctcctgtctgtcattggttatgccgtggatctgggc
aacatctggcgttttccctacatatgctaccagaatggcggaggggccttcctcctccct
tacaccatcatggccatctttggtgggatcccgctcttttacatggaacttgcgctgggc
cagtaccaccgaaatgggtgcatttctatatggaggaagatctgcccgattttcaaaggc
atcggctatgccatctgcatcattgccttttatatcgcctcctactataacaccatcata
gcctgggcgctctactacctcatctcctccttcacggaccagctgccctggaccagctgc
gagaactcttggaacactggaaactgcaccaactacttcgcccaggacaacatcacctgg
acactccattccacgtcacctgcggaggagttttacttgcgccatgtcctgcagatccac
cagtctaagggcctccaggacctggggaccatcagctggcagctggctctgtgtatcatg
ctcatcttcaccgtcatctactttagcatctggaaaggagtcaaaacatctggcaaggtg
gtgtgggtgacagccaccttcccttacattgtcctttctgtcctgctggtgaggggggcc
acccttcctggagcctggagaggagttgtcttctacttgaaacccaactggcagaaactc
ttggagacaggggtgtgggtagatgctgcagctcagatcttcttctctcttggcccgggc
tttggggttctcctggcttttgctagttacaacaagttcaacaacaactgttatcaagat
gccctggtgaccagtgtggtgaactgcatgacgagctttgtctctggctttgtcatcttc
acggtgcttggctacatggctgagatgaggaatgaagacgtgtccgaggtggccaaagac
gcgggccccagcctccttttcatcacatatgcggaagcgatagccaacatgccagcatcc
acattctttgccatcatctttttcctcatgttaatcacgctgggtttggatagcacgttt
gcgggcctggaaggtgtgatcacagctgtgctggatgagtttcctcacatctgggccaag
cgcagggaatggttcgtgctcatcgtggtcatcacttgcatcttgggatccctgctcaca
ctgactgcaggaggggcgtacgtggtgaccctgttggaggagtatgccacagggccagca
gtgctcactgtggccctcatcgaggccgtcgctgtgtcttggttctatggaatcactcag
ttctgcagcgacgtgaaggaaatgctgggcttcagcccgggatggttttggaggatctgc
tgggtggtcatcagccctctgtttctcctgttcatcatttgcagttttttgatgagccca
ccccaactacggcttttccaatataattatccccactggagcatcatcttgggttactgc
atagggacgtcctctgtcatctgcatccctacgtacattgtttatcgactgatcagcact
ccagggacactaaaggagcgcattgttaaaggtatcactcctgaaacaccaacggaaatt
ccatgtggggacatccgcatgaatgctgtgtaa
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