Arvicanthis niloticus (African grass rat): 117718128
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Entry
117718128 CDS
T08817
Symbol
Hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00780
Biotin metabolism
anu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
117718128 (Hlcs)
Enzymes [BR:
anu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
117718128 (Hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
117718128 (Hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
117718128 (Hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
117718128 (Hlcs)
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Exc
Motif
Other DBs
NCBI-GeneID:
117718128
NCBI-ProteinID:
XP_034371532
EnsemblRapid:
ENSANLG00005010246
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Position
12:complement(75523533..75683605)
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AA seq
869 aa
AA seq
DB search
MLITLCYLYLWARWGRRPAAVVLSTVRRLRASRCSFTFCRAAAQPGGARVCLSRGGRVFC
VGESQSVDDLNKWALFLVSPFILDAEHIAFVTESIWAQGTSFQEPPSSETVVRWSDCCSP
LACRPGDPYQLIAEASVVNFSKLGAAFMEDRLQMDNGLIAQKIVSVHLKDPALKELSKAS
DKRVQALPLSPEASLEAQPVEGVMEHAGQGDWKAAGEGPSPQRSGCASGSESAADGDPGP
SSTELCQLHLSSCHECLQLENSTIESVRCASAENIPDLPCDRSGMEGAAGELCPQWKAKR
VNISGKAPNILLYVGSGSEEALGRLQQVRSVLTDCVDRDSYTLYQLLEDSALRDPWPDNC
LLLVIASRDPIPKDIHHKFMAYLSQGGKVLGLSSSFTFGGFRVTRRDALQNTAQSLLFSK
ADGSEVRLSVLSSGYIYEEGPSPGRLQGHLENEDKDKMIVHVPFGTCGGEAVLCQVHLEL
PPSASLVQTSDDFNVLKSSNMRRHEVLKEILTALGLSCDSAQVPALTPLYLLLAAEEIQD
PFMQWLGKHSDPEGIIKSSKLSLKFVSSYTSEAEITPSSIPVVTDPEAFFSEHFNLETYR
QNLQTTRLGKVILFAEVTSTTMSLLDGLMFEMPQEMGLIAIAVRQTQGKGRGPNAWLSPV
GCALFTLLVSIPLRSQLGQRIPFVQHLMSLAVVEAVRSIPEYEDINLRVKWPNDIYYSDL
MKIGGVLVNSTLMGETFYILIGCGFNVTNSNPTICINDLVEEYNKQHEAGLKPLRADCLI
ARAVTVLEKLIDRFQDQGPDGILPLYYKYWVHSGQQVRLGSSEGPQVSIVGLDDSGFLQV
HQEDGGVVTVHPDGNSFDMLRNLIVPKRQ
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacgctgtgctacctgtacctgtgggcgcgctgggggcgccggccggccgca
gtggtgctgtccacggtgcggcggctgcgcgcctcgcgctgctccttcaccttctgccgc
gcggccgcgcagcccgggggcgcgcgcgtgtgcttgagccgcggcggccgcgtcttctgc
gtcggcgagagccagtctgttgacgacttgaacaaatgggccctgtttctcgtgtctccc
ttcatacttgacgcagaacatatagcatttgtgacagagagcatttgggcacaaggcacc
agtttccaggaaccaccgtcttcagaaaccgttgtgagatggtcagactgctgttcaccg
ttagcctgccgccctggggacccctaccagttaattgctgaagcaagcgtggtcaacttc
agcaagctcggggcggccttcatggaggacaggctccagatggataacggcctcatagcc
cagaagattgtttcagttcacttaaaggaccctgctctgaaggagctcagcaaggcctct
gacaaacgagtgcaggctctacccctgagcccagaagcttcccttgaggcccagcctgtg
gaaggtgtcatggagcatgctggccaaggtgactggaaggctgctggtgaaggcccttcc
ccacagaggagcggctgcgcctctggaagtgagtctgctgcagatggggatccagggccg
agctccacggagctctgtcagctccacctgtccagttgccacgagtgtttgcaacttgag
aacagcaccatcgagtcggtgaggtgtgcgtctgcagagaacattccagatcttccctgt
gatcgcagcggtatggagggtgctgccggtgaactctgccctcagtggaaagcgaagaga
gtcaatatttcaggaaaggcacccaatatcctgctgtacgtgggctctggttccgaggaa
gccctgggccggctccagcaggtgcgatctgtcctgactgactgtgtagacagggacagc
tacactctctaccagctgctagaagacagcgctctgagggacccgtggccagacaactgc
ctcctgttagttattgccagcagggaccctatccccaaggacatacaccacaagttcatg
gcctatctttctcagggagggaaggtgctgggcctgtcttcctccttcacgttcggtggc
tttcgggtgaccaggagagacgcgctacagaacacagcccagagcttgcttttctctaag
gctgacgggagtgaggtacggctcagtgtcctgagcagtggctacatttatgaggaaggc
ccaagccctggcaggctccagggccacctggagaatgaagacaaggataaaatgattgtg
cacgtgccttttggaacctgcggaggggaagccgttctctgccaggtgcatctggagctc
cctccaagtgcgtccctggtgcaaacctcagacgactttaatgtgctcaaatccagcaac
atgagaagacacgaggtccttaaggagatcctgactgccctcggtctgagctgtgactct
gcacaggttcctgccttgacaccgctgtacttactgctggctgctgaggaaatccaggat
ccatttatgcagtggctcgggaagcactcggatcctgaaggaatcataaaatccagcaag
ctctcccttaagtttgtttcctcctacacatctgaagcggagatcaccccatcttccatc
cccgtggtcaccgacccagaagccttcttctcagagcactttaacctagagacctatcga
cagaacctgcagaccacgcgccttgggaaagtaattctgtttgcagaagtgacgtccacg
accatgagtctcctggatgggttgatgtttgagatgccgcaggaaatgggtttaatcgcc
attgcagttcggcagacccagggcaaaggaaggggcccgaatgcctggctgagccctgtg
ggatgcgcccttttcactctgctggtctccatccccctgaggtcacaactgggacagagg
attccatttgtccagcatttgatgtccctggccgtggtggaggcagtgcggtctatccca
gagtatgaggatatcaacttgcgagtgaagtggcccaatgatatttattacagcgatctc
atgaagatcggtggggttctggttaattcgacacttatgggagaaacattttatatcctc
attggctgtggattcaatgtgaccaacagtaatcctaccatatgtatcaatgacctcgtc
gaagaatacaacaagcagcacgaggcaggcctgaagcccctgcgagccgactgtctcata
gccagggccgtgaccgtgctggagaaactgattgacaggtttcaggaccaagggcccgac
ggcattctgcccctctattataaatactgggtgcacagtggtcagcaagtccgcctgggc
agcagcgaggggccacaggtgtccattgtgggccttgatgattccgggttcctgcaggtc
caccaagaggacggtggggttgtgacggtgcatccagacggcaactccttcgacatgctg
agaaacctcattgtacccaagcgacagtaa
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