Arvicanthis niloticus (African grass rat): 117719895
Help
Entry
117719895 CDS
T08817
Symbol
Prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00310
Lysine degradation
anu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117719895 (Prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117719895 (Prdm6)
03036 Chromosome and associated proteins [BR:
anu03036
]
117719895 (Prdm6)
Enzymes [BR:
anu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
117719895 (Prdm6)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117719895 (Prdm6)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117719895 (Prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
117719895
NCBI-ProteinID:
XP_034374187
LinkDB
All DBs
Position
14:complement(34963554..35066166)
Genome browser
AA seq
597 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGGGGPLKGSGAALALGAPQPLQPPPPPPPP
PPERAEPPPDGLRPRPASLSSVSSTPAPSSTSASSASSCAAAAAAAALAGLSALPVAQMP
VFAPLAAAAVAAEPLPPKDLCLGASSGPGPAKCGGGGSVGDGRGVPRFRCSAEELDYYLY
GQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELP
EWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQTGAVRNTQHL
WEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGT
ELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFNKSSKLSPSGQQRS
VVFPQTPCSRNFSLLDKSGPIEAGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQC
FKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAF
AGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggggaccccgggggctcggccttcctcaaagtggacccagcttacctg
cagcactggcagcaactcttcccgcacggcggcggcggcggcccgctcaaaggcagcgga
gccgcgctcgccctgggcgcgccccagcccctgcagccgccgccgccgccgccgccaccg
cctcctgagcgcgccgagcctcctccggacggcctgcggccgcggcccgcctcgctctcg
tccgtctcgtccaccccggctccgtcctccacctctgcctcttctgcctcctcctgcgcc
gccgccgctgccgccgccgccctggcgggtctctcggccctgccggtggcgcagatgccg
gtgttcgcgcctctagctgctgctgcggtggcggcggagccgctgcccccaaaggacctg
tgcctcggtgcctcctccggcccggggccggccaagtgcggcggcggcggcagcgtgggg
gacggtcgtggcgtcccacgtttccgctgcagcgccgaggagctggactattacctgtac
gggcagcagcgcatggaaatcatcccgctcaaccagcacaccagcgaccccaacaaccgt
tgcgacatgtgtgcggacaaccgcaacggggaatgccccatgcacgggcccctgcactct
ctgcgccggcttgtgggcaccagcagcgcagcggccgctgcacccccgccggagctgccg
gagtggttgcgggacctgcctcgggaggtgtgcctgtgcaccagcacggtgccaggcctg
gcctacggcatctgtgccgcgcagaggatccagcagggcacctggattgggcccttccag
ggcgtgctcctgccaccggagaaagtgcagaccggcgcagtgaggaacacgcagcatctc
tgggagatatatgatcaagatgggacacttcagcactttattgatggtggggaacctagt
aagtcgagctggatgaggtatatccgatgtgcaaggcactgtggagaacagaatctaaca
gtagttcagtacaggtcgaatatattctaccgagcctgtatagatattcccaggggcacc
gagcttctggtgtggtacaatgacagctatacgtctttctttgggatccctttacaatgc
attgcccaggatgaaaacttgaacgtcccttccacggtaatggaagccatgtgccgacaa
gacgccctgcagcccttcaacaaaagcagcaagctttctccctccggtcagcagcgctcc
gtggttttcccacagactccctgcagcaggaatttttccctattggataaatctgggccc
attgaggcaggatttaaccaaatcaacgtgaagaatcagagggtcctggcgagcccaacc
tctaccagccagctgcactccgagttcagcgactggcacctctggaagtgcggccagtgc
tttaagactttcactcagcgcattctcctgcagatgcatgtgtgcacacagaaccccgac
agaccctaccagtgtggccactgctcgcagtccttttcccagccgtcagaactgaggaac
catgtagttactcactccagtgaccggcctttcaagtgtggctactgtggccgtgccttt
gctggggccaccaccctcaacaaccacatccggactcacactggagaaaagcccttcaag
tgcgagaggtgcgagaggagcttcacccaggccacgcagctgagtcgacaccagcgcatg
cccaatgagtgcaagccgataaccgagagcccggaatcaatcgaagtggattaa
DBGET
integrated database retrieval system
