Arvicanthis niloticus (African grass rat): 117723004
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Entry
117723004 CDS
T08817
Symbol
Mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu01522
Endocrine resistance
anu04670
Leukocyte transendothelial migration
anu04912
GnRH signaling pathway
anu04915
Estrogen signaling pathway
anu04926
Relaxin signaling pathway
anu04933
AGE-RAGE signaling pathway in diabetic complications
anu05200
Pathways in cancer
anu05205
Proteoglycans in cancer
anu05219
Bladder cancer
anu05415
Diabetic cardiomyopathy
anu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
117723004 (Mmp2)
09152 Endocrine system
04912 GnRH signaling pathway
117723004 (Mmp2)
04915 Estrogen signaling pathway
117723004 (Mmp2)
04926 Relaxin signaling pathway
117723004 (Mmp2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117723004 (Mmp2)
05205 Proteoglycans in cancer
117723004 (Mmp2)
09162 Cancer: specific types
05219 Bladder cancer
117723004 (Mmp2)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
117723004 (Mmp2)
05415 Diabetic cardiomyopathy
117723004 (Mmp2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
117723004 (Mmp2)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
117723004 (Mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117723004 (Mmp2)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
117723004 (Mmp2)
Peptidases and inhibitors [BR:
anu01002
]
Metallo peptidases
Family M10
117723004 (Mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Peptidase_M66
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
117723004
NCBI-ProteinID:
XP_034378236
EnsemblRapid:
ENSANLG00005021370
LinkDB
All DBs
Position
18:20180494..20207043
Genome browser
AA seq
662 aa
AA seq
DB search
MEARVAWGALAGPLRVLCVLCCLMNLAIAAPSPIIKFPGDVAPKTDKELAVQYLNTFYGC
PKESCNLFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWD
KNQITYRIIGYTPDLDPETVDDAFARALKVWSDVTPLRFSRIHDGEADIMINFGRWEHGD
GYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFN
GREYSSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNADGQPCKFPFRFQGT
SYNSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKY
ESCTSAGRSDGKVWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGAL
MAPIYTYTKNFRLSHDDIKGIQELYGPSPDADTDTGTGPTPTLGPVTPEICKQDIVFDGI
AQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGN
EYWVYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWNKNKKTYIFAGDKFWRYNEVKKKM
DPGFPKLIADSWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWL
GC
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacgagtggcctggggagcgcttgctggccctctgcgggttctctgcgtcctg
tgctgcctgatgaacctcgccatcgctgcaccgtcgcccatcatcaagttccccggtgat
gttgcccccaaaacagacaaagagttggcagtgcaatacctgaacacattctatggctgt
cccaaggagagttgcaacctctttgtgctgaaggataccctcaagaagatgcagaagttc
tttgggctgccccagacaggtgaccttgaccagaacaccatcgagaccatgcggaagccg
agatgtggcaatccagatgtggccaactacaactttttcccccgcaaacccaagtgggac
aagaaccagatcacatacaggatcattggatacacacctgacctggaccctgagacagtg
gatgatgcctttgctcgggccttaaaagtatggagtgatgtgactccactacgcttttct
cgaatccacgatggggaagctgacatcatgatcaactttggacgctgggagcatggcgat
ggatacccatttgatggcaaggatggactcctggcacatgcctttgccccgggcactggt
gttgggggagattctcactttgatgatgatgaactgtggaccctgggagaaggacaagtg
gtccgcgtaaagtatgggaatgctgatggcgagtactgtaagttccccttcctgtttaac
ggtcgggaatacagtagctgcacagacactggccgcagcgatggcttcctctggtgctcc
accacatacaactttgagaaggatggcaagtatggcttctgcccccatgaagccttgttt
accatgggtggcaatgcagatggacagccctgcaagttcccgttccgcttccagggcaca
tcctacaacagctgtaccactgagggccgtacagacggctaccgctggtgtggcaccact
gaggactatgaccgggataagaagtacggattctgccccgagactgctatgtccactgtg
ggtggaaattcagaaggtgctccatgtgtcttccctttcactttcctgggcaacaagtat
gagagctgcaccagtgccggccgaagtgatggcaaggtatggtgtgcgaccacagccaac
tacgatgatgaccggaagtggggcttctgtcccgaccaaggatatagcctattcctcgtg
gcagcccatgagttcggccatgccatggggctagaacactctcaggacccaggagctctg
atggcccctatctacacctacaccaagaacttccgattatcccatgatgacatcaagggg
atccaggagctctatgggccttcccctgatgctgatactgacactggtactggacccacg
cctacactgggacctgttactccagagatctgcaaacaggacattgtctttgatggcatc
gctcagatccgtggtgagatcttcttcttcaaggaccggtttatttggcggacagtgaca
ccacgtgacaagcccacaggtcccttgctggtggccacgttctggcctgagctcccagaa
aagattgatgccgtgtatgaggccccacaggaagagaaggctgtgttcttcgcagggaat
gagtactgggtctattctgccagcactctggagagaggataccccaagccactgaccagc
ctggggttaccccctgatgtccagcgagtagatgctgcctttaactggaataagaacaag
aagacatacatctttgctggagacaagttctggagatacaatgaagtgaagaagaaaatg
gatcccggtttccctaagctcattgcagactcctggaatgccatccctgataacctggat
gcagtcgtggacctgcagggcggtggtcacagttacttcttcaagggtgcttattacctg
aagctggagaaccaaagtctgaagagtgtgaagtttggaagcatcaaatcggactggctg
ggctgctga
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