Arvicanthis niloticus (African grass rat): 117724386
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Entry
117724386 CDS
T08817
Symbol
Lss
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00100
Steroid biosynthesis
anu01100
Metabolic pathways
Module
anu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
117724386 (Lss)
Enzymes [BR:
anu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
117724386 (Lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
117724386
NCBI-ProteinID:
XP_034380039
EnsemblRapid:
ENSANLG00005026735
LinkDB
All DBs
Position
20:41123827..41160781
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AA seq
751 aa
AA seq
DB search
MTEGTCLRRRGGPYKTEPATDLTRWRLRNELGRQRWTYYQAEEDPGREQTGLEAHSLGLD
TRSYFTDLPKAQTAREGALNGVTFYAKLQAEDGHWAGDYGGPLFLLPGLLITCHISCIPL
PAGYKEEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVALRILGVGPDDPDVVRARNI
LHKKGGAVGIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPEWFPAHPSTLWCHCRQVYLP
MSYCYATRLSASEDPLVQSLRQELYVEDYASIDWPAQKNNVSPDDLYTPHSWLLRVVYGV
LNLYERFHSTSLRQWAIQMLYEHIVADDRFTKCISIGPISKTINMLVRWSVDGPSSPAFQ
EHVSRIKDYLWLGLDGMKMQGTNGSQIWDTAFAIQAMLEARAHHRPEFLPCLQKAHEFLR
LSQIPDNFPDYQKYYRHMHKGGFSFSTLDCGWIVADCTAEALKAVLLLQNQCPSITEHIP
RERLCDAVAVLLSMRNSDGGFATYETKRGGHLLEMLNPSEVFGDIMIDYTYVECTSAVMQ
ALKHFHECFPDHRTEEIRETLNQGLDLCRKKQRADGSWEGSWGVCFTYGTWFGLEAFACM
GHTYQDGAACAEVTQACNFLLSRQMADGGWGEDFESCEQRRYVQSARSQVHSTCWALMSL
MAVRHPDITAQERGIRCLLGKQLPNGDWPQENISGVFNKSCAISYTSYRNIFPIWTLGRF
SNLHWADGPVVTNIGCSFRGPGFDSQHPPGG
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgactgagggcacgtgtctgcggcgtcgtgggggaccctataaaactgagcccgccacc
gatctcacccgctggcggctccgcaatgagttgggtcggcagagatggacgtattatcaa
gcggaggaagaccctggtcgagaacagaccgggctagaggcccactctttgggactggac
acaaggagttatttcacagacttacctaaagcgcaaacagcccgagagggagccctgaat
ggagtaaccttttatgccaagctgcaggctgaggatggacactgggctggtgattatggt
ggtccactcttcctcttaccaggtctcctgattacatgtcacatatcatgcatccctctg
ccagctgggtacaaagaggagatggtacggtacctgcggtcagtgcagctccctgatggc
ggctgggggttgcacattgaggacaagtccacagtgtttgggaccgccctgaactatgtg
gctctcagaatcctgggtgttgggcctgatgaccctgacgtagtgcgcgctcggaacatt
cttcacaaaaaaggtggtgcagtgggcatcccttcctgggggaagttctggctggctgtc
ctgaatgtgtatagctgggaaggactcaataccctcttccctgagatgtggctgtttcct
gaatggttccctgcgcacccctccactctctggtgtcactgccggcaggtctatcttccc
atgagctactgctacgccactcggctaagtgcctcagaggacccactggttcagagcctc
cgccaggaactctatgtggaggattatgccagcatcgattggccagcacagaagaacaac
gtgtcccccgatgacctgtacacgccacacagctggctgctgcgtgtggtgtatggagtc
ctcaacctctatgaacgtttccatagtaccagcctgcggcagtgggccatccagatgctg
tatgaacacattgtagctgatgatcgcttcactaaatgcatcagcattggcccgatctca
aaaaccatcaacatgcttgttcgttggtcagtggatggcccatcctcccctgccttccag
gagcacgtctctaggatcaaggattacctttggctgggcctcgatggcatgaaaatgcag
ggcaccaatggatcacagatctgggacactgcatttgctatccaagcaatgttggaggca
cgtgcacaccacagacctgagtttctgccctgcctgcagaaggctcacgagttcctgcgg
ctctcacagatcccagacaacttccctgactatcagaagtactatcgccatatgcacaag
ggcggcttctccttcagcacactggactgtggctggatcgttgctgactgtacagccgag
gctttgaaggccgtgctgctcctgcagaatcagtgtccctcaatcaccgagcacatcccc
cgagagcggctttgcgacgctgtggcagtgttgttaagcatgaggaattctgatggagga
tttgctacctatgagactaagcgtgggggacacttgctggagatgttgaacccctcagag
gtctttggagacatcatgatcgactacacgtatgtagagtgtacctctgcagtgatgcag
gcactgaagcacttccatgaatgcttcccagaccacaggacagaagagatcagggagacc
ctcaatcaaggcctggatttatgccgaaagaagcagagagctgatggctcctgggagggc
tcctggggggtttgtttcacctacggcacctggtttggcttggaagcattcgcttgcatg
gggcatacctaccaagacggggctgcttgtgcagaagtaactcaggcctgcaacttcctc
ctgtcccggcagatggcggatggaggctggggggaggactttgagtcctgtgaacagcgg
cggtatgtgcagagtgccaggtcccaggtccacagtacatgctgggccctgatgagtttg
atggctgtcaggcatccagacatcaccgctcaggagagaggaatcagatgtctgctaggg
aagcagctccccaatggagactggcctcaggagaacatctctggggtcttcaacaagtcc
tgtgccatcagctacacaagttacagaaatatcttccccatctggaccctgggccgcttc
tccaacctacactgggctgacggcccagttgtaacgaacatcggctgctctttcagagga
cctggatttgattcccagcacccacctggtggctaa
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