Anaerotignum sp. MB30-C6: RBQ60_05320
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Entry
RBQ60_05320 CDS
T09679
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
anv
Anaerotignum sp. MB30-C6
Pathway
anv03030
DNA replication
anv03410
Base excision repair
anv03420
Nucleotide excision repair
anv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBQ60_05320 (polA)
03410 Base excision repair
RBQ60_05320 (polA)
03420 Nucleotide excision repair
RBQ60_05320 (polA)
03440 Homologous recombination
RBQ60_05320 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anv03032
]
RBQ60_05320 (polA)
03400 DNA repair and recombination proteins [BR:
anv03400
]
RBQ60_05320 (polA)
Enzymes [BR:
anv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBQ60_05320 (polA)
DNA replication proteins [BR:
anv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RBQ60_05320 (polA)
DNA repair and recombination proteins [BR:
anv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RBQ60_05320 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBQ60_05320 (polA)
BRITE hierarchy
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DUF3572
Motif
Other DBs
NCBI-ProteinID:
WMI82158
UniProt:
A0AA51CDW8
LinkDB
All DBs
Position
1022447..1025101
Genome browser
AA seq
884 aa
AA seq
DB search
MTEKIMLIDGNSIVNRAFYGVPLLTNSEGRYTNGVYGFLNILFKLMDEEKPDYLAVAFDL
HAPTFRHKEFDGYKGTRKGMPGELREQMPLLKEMLQAMNIQIYEVEGYEADDILGTLSAV
AEEQGILPVVVSGDRDLLQLASETLKVRIPKTKGGKTETEDYFAKDVIEKYGVTPLEFID
VKALMGDPSDNIPGVPGIGEKTAVKIIQSYHDLENAIAHCAEVKPKKASENLGEFQEQAR
LSKFLATIVRDMPISFEKEETIIQDLFNPTAYNLVKRLELKSMYDRFEKEEVHTEPMQDY
CGIYTLDEAKAFFSELEKKETAYILYSDEGVCHGIALYQEDLGGCWVEIGESLTAEKLFD
TATPFFTDKEFVKIGHDMKKDVKLLRSYIGKTPEISFDTAIAAYILNPTSSSYEYDDLAR
TFLNQVYPAAEEVLGKGRNKKAFLELSKEERRNFVVSQAKVTFEAKKVMVEQLQENGQNQ
LFYEIEMPLIYVLADMEEYGIKVDKNALLQYQKNLEESIDVITKEIYALSGEEFNLNSPK
QLGIILFEKLGLKGGKKTKTGYSTAADVLEKLKYEHPMVEKILYYRQLAKLKSTYADGLL
AVMDEKTEKIYSTFNQTITATGRISSTEPNLQNIPVRLELGRELRKIFIPESREYCFLDA
DYSQIELRVLAHIANDETLVNAFCNNQDIHSLTASQVFHVPFDEVTPLQRSNAKAVNFGI
VYGIGSFSLSQDLGITRKEAEQYISAYFAKYPNIKKYLDETIAEATEKGYVSTLWQRRRA
MPELQSKNFIQRSFGERVAMNMPIQGSAADIIKIAMVRVHRALKEGGYRSRLILQVHDEL
LIETHLEEKEAVAKILKENMEQAAQLSVPLDVDVHEGNSWFEAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaaattatgttaatagacggaaacagtattgtgaaccgtgctttttacggt
gtacccctgctgaccaacagcgaagggcgttataccaatggggtatacggatttttgaat
attttatttaaattaatggacgaagaaaagccagattacttggcagttgccttcgattta
catgcccctaccttccgtcataaggaatttgacggctataagggaacgagaaagggtatg
cctggcgagttgcgagagcagatgcctttactaaaagaaatgcttcaggccatgaatatc
caaatttatgaagtggaaggttatgaggccgatgatattttaggtacactgtctgctgtg
gcggaagaacaggggattttacccgttgttgtttccggagatcgagacttattgcagctt
gccagtgaaactttgaaagttcgaatccccaaaacaaaaggggggaaaacggaaacggaa
gattactttgcgaaggatgttattgaaaaatatggggtaactcctttagaatttattgac
gtgaaggccttaatgggggatccttccgataatatccctggggtgccaggcattggtgaa
aagactgcggtaaaaattattcaaagctatcatgacttggaaaatgccattgcccattgt
gccgaggttaagcctaaaaaagcgtcggaaaatttaggagaattccaagagcaggcaagg
ttaagtaagtttttggcaaccatcgtgagggatatgccgatttcctttgaaaaagaagaa
acaatcattcaggacttattcaaccctactgcttataacttggtaaagcgtttggagttg
aaaagtatgtacgaccgctttgaaaaggaggaagtgcatacggagccaatgcaagattat
tgtggaatttacactttagacgaagcaaaggcattcttctctgagttagaaaaaaaagaa
actgcttacattctttattctgatgaaggggtgtgccacggtattgccttatatcaagag
gatttaggtggttgttgggtggaaattggtgagagcttgactgcggagaagctttttgac
acggctacccctttttttacagataaagagttcgtgaaaatcggccacgatatgaaaaaa
gatgtgaaattactacgcagttacattggtaaaactcctgaaatttcctttgataccgcc
attgccgcttatattttgaatcccacaagctcctcttatgaatatgacgatttagctaga
acctttttaaatcaggtttatcctgctgccgaggaagttttgggcaagggtagaaataaa
aaggcatttcttgaactttccaaggaagaaagaagaaattttgttgtttctcaggccaag
gtaacctttgaagcaaaaaaagtaatggtggaacagcttcaggaaaacgggcagaatcag
ctattttatgaaattgaaatgccattgatttatgttcttgcagatatggaagaatacggg
attaaggtggataaaaatgcgttattgcaatatcagaagaatctggaagagagtattgat
gtaattacaaaggaaatttacgctctttcaggggaagaattcaatttgaactctccaaaa
cagttgggcataattttatttgaaaaattaggcctaaagggtggaaagaaaacaaaaaca
ggctattcaactgcagccgatgttttggaaaaattaaaatatgaacaccctatggtggaa
aaaatactgtattatcgtcagttggcaaagctaaaaagcacttatgccgacgggctttta
gcagtgatggatgaaaaaacagagaaaatttactctacttttaatcagaccattaccgcc
acaggacgtatcagctctacggagccgaatttgcagaatattcccgttcgcctagagttg
ggccgtgagcttagaaagatttttattcctgaaagcagggagtactgtttcttggatgcg
gattactctcagattgagttgcgagttcttgcccatattgctaatgatgaaactctagtc
aacgctttttgtaacaatcaggatattcatagcttaacagcatcgcaagttttccatgtt
ccttttgatgaggttacaccgttacaaagaagtaatgcaaaggcagtaaacttcggtatt
gtttacggtattggctcctttagtttgagtcaagatttggggattactcgaaaagaggca
gaacagtacatttcggcatattttgcaaagtaccctaatatcaaaaagtatttggacgaa
accattgccgaagcaacggaaaaaggctatgtctccaccctttggcaaagaagaagggct
atgcctgaattgcaaagcaaaaacttcatacagcgttctttcggggagagagtggccatg
aatatgcccattcaaggaagtgcggcggatattattaaaattgccatggttcgtgtgcat
agggcattaaaagaggggggctaccgttcccgtttgattttgcaggtgcacgatgagctg
ctgattgaaacgcatttggaggaaaaagaagcagtggcaaagattttaaaagaaaatatg
gagcaggcagcccagctttctgttcctttagatgtagatgtgcatgagggaaactcatgg
tttgaggcgaagtaa
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