Amphiprion ocellaris (clown anemonefish): 111564416
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Entry
111564416 CDS
T06018
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03020
RNA polymerase
aoce04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111564416
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
111564416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111564416
Enzymes [BR:
aoce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111564416
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111564416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111564416
NCBI-ProteinID:
XP_023119731
Ensembl:
ENSAOCG00000003949
LinkDB
All DBs
Position
Unknown
AA seq
1391 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHSPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSSIMLTKE
EKLQFMDFLKRPNLAYLQKRGLKKKISDKCRKRTICLNCAAFNGPVKKCSLLKIIHEKYK
TTKKVVDHFVSEFMQSFDTAIEHNKLVEPLLTRAQENLNPLVVLNMFKRIPQEDIPLLLM
NPEAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDXDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANF
IQNRTAQIKRFLKYGNREKIAQELRFGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKIKISLPRPAIMKPMALWTGKQI
FSMILKPSKECPVKANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALETGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGRDGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYACSDEPALSQNELVLTAEAIMKRADFLC
CRDSFLEEIKKFIKGVSERIKKTRDKYGINDNGTSEPKVLYQLDLCLMKVDSAQDXSFXC
ASSYRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKN
ISTPIITAHLDVEDDADYARLVKGRIEKTLRGEISEYIEEVFLPDDCFILVKLSLERIRL
LRLEVNAETVHYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKRSMYYVLQSLKEELPKV
VVQGIPEVARAVIHIDEQSGKNKYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVERTLG
IEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMPYKGEILGITRFGLAKMKESVLMLA
SFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPSPVKRPLLF
DTPDFHIPLIT
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggcgaaaaaaataagccacatctgcttt
gggatgaaatctgctgagcagatgcgacagcaggcccacatccaggtggtcagtaagaac
ctgtacagccaagacaccaaacactccccactgccctatggagtgctggaccaccgtatg
ggtaccagtgagaaggacaggccctgtctgacatgtgggaagaacctggccgattgtttg
ggacattacggctacctggacctggagctcccatgttttcatgttggctatttcaaagcc
accataggaatcttgcagatgatttgcaagacgtgctcaagcataatgctgacgaaagag
gagaagctgcagttcatggatttcttgaagcggcctaacctggcctatctccagaaacgg
gggttgaagaagaagatctccgataaatgccgcaaaaggacaatctgtctaaactgtgcc
gctttcaatggaccggtgaaaaagtgcagcctgctgaagatcatccatgagaagtataaa
acaactaagaaggtggtggatcattttgtgtcagaattcatgcagtcctttgatacggcc
atcgaacataacaaactggtcgagcctctgctgaccagagcacaggaaaacctgaatcct
ctggtggtcctgaacatgtttaaaaggattccccaagaagacatccccctgctgctgatg
aaccctgaagcagggaaacccgcagacctcatcatcacccgcctccttgtgcctcctctc
tgcatccgaccctctgtggtcagcgacctcaagtcgggcaccaatgaggacgacctcacc
atgaagctgacagagataatcttccttaatgacgtcatcaaaaagcatcgtatgaccggg
gcgaagacccagatgatcatggaggactgagacttcctccagctgcagtgtgccctttat
atcaacagtgaactttctggcatccccctcaacatggcacctaagaaatggaccagaggc
tttgtacagagactcaagggaaagcaaggtcgattcaggggaaacctctcagggaaacga
gtggacttctccggccgaactgtcatttctcctgacccgaacctgaggatcgacgaggtg
gccgtccctgtgcatgtggccaaaatcctgacgtatccagagagggtaaacaaagccaat
ctggagctaatgaggaaacttgtccgcaatggtccggacgttcaccccggagccaacttc
atccagaaccgtaccgcacagataaagaggtttttaaaatatggaaaccgtgaaaagatt
gctcaggaactgaggtttggtgacgtggtggaacgacacctgatagatggagacattgtg
ctcttcaatcgacagccctctctgcacaaactcagcatcatggcccacattgccagagtc
aaaccacacaggacatttcggttcaacgagtgtgtgtgcaccccgtacaatgccgacttt
gatggtgatgaaatgaatctccacttacctcagactgaagaggccaaagccgaggccctg
gtcctgatggggaccaaagctaatctcgtcactccaagaaatggcgaaccactgattgct
gctattcaggactttttgacaggagcttatctcttgacgctcaaggacaccttctttgac
agatcaaaagcctgtcagatagtggcatcaattcttgtgggaaaagatgagaaaatcaag
atctctctcccgcgccccgctatcatgaagcccatggctctgtggaccggaaaacagatc
ttcagcatgattctgaagcccagtaaggagtgtccagtgaaggccaacctgcggaccaaa
ggcaaacagtactgcggcaagggagaggatctctgtcacaatgactcctttgtggtgatt
cacaacagtgagctgatgagtggcagcatggacaagggcactttgggatccggctccaag
aacaacattttttacatcctgctgagagactggggacagcttgaggctgctaacgccatg
tcccgcctggcgagactggctccggtgtatctctccaacagaggtttctctattggaatt
ggtgacgtgacacctggacagggtctgctgaaagccaaacaggacctgctggatgacggc
tacaagaagtgtgatgagtacatcgaagctttggagacgggcaagttacagcagcagccg
ggctgcacagcagaggagacactggaggctctgatcttgagagagctgtctgtaatcaga
gaccgagccggcagtgcctgtctcagggagctcgacaaaagtaacagtcctctgatcatg
gccctctgtggctccaaaggatccttcattaatatctctcagatgattgcttgtgtgggc
cagcaggccataagtggctctcgagtacctgatggttttgagaatcgctccctgcctcac
tttgaaaaacactcaaagcttcctgctgctaaaggctttgtggcggacagcttctattct
ggtctgacacccacagagttcttctttcacaccatggcaggccgagacggtctggtggac
actgcagtgaaaactgcagagactggatacatgcagagacgtctagtgaagtctctggag
gatttgtgctcacagtacgacctgacagtacgcagctccacgggtgacatcatccaattt
atttatggcggcgacggcctggatcctgctgcaatggaaggaaaggatgagccgctggag
tttaagagagttctggacaacattcgggcggtctatgcatgttcagatgagcctgcactc
agtcaaaatgagctggtcctcactgcagaagctatcatgaaaagagctgatttcctgtgc
tgcagagacagcttcttggaggagataaagaaattcattaaaggtgtttcagaaaggatc
aagaagaccagagacaagtacggcataaacgacaacggcactagtgagccaaaagttctc
tatcagctggacctttgtttaatgaaagttgactcggctcaagactgatccttctgatgt
gcttcctcgtatagagcccagatggaaccaggctcagcagtaggtgccctgtgtgctcag
agcatcggagagcctggcactcaaatgacactgaaaacctttcacttcgccggtgtagct
tcaatgaacatcactctgggggttcctcgcataaaggaaatcatcaatgcttccaagaac
atcagcacccctataatcacggctcacttggatgtggaagacgacgctgactatgccagg
ctggtgaaggggagaattgagaagactcttcgaggagagatttctgagtacatagaagag
gtttttcttccagatgactgcttcatcctggtgaaattatcactggagagaatcagactg
ctgcgactggaggtaaatgcagaaacagtgcattattccatctgcatgtctaaactacga
gtcaaacctggagacattgctgtgcacggcgaggcggtggtatgtgtgtctccacgagaa
aacaacaaacgctccatgtactatgtgctgcagtcattaaaagaagaacttcctaaggtg
gtggttcaaggcataccagaggtcgcccgagcagttattcacattgacgaacagagtggc
aagaacaagtacaaacttctggtggagggcgacaatctgagagctgtcatggcaactcac
ggagtgaatgggagtaggaccacatcaaacaacacatacgaggttgagaggactttgggt
attgaggctgcaagatccaccatcatcaatgagattcagtacaccatggtcaaccacgga
atgagcatcgaccggcgtcacgtcatgcttcttgctgatcttatgccctataagggggag
attctgggaattaccaggtttggtttagccaaaatgaaggaaagtgtcctcatgctggcc
tccttcgagaaaacagctgatcatctcttcgatgctgcctattttggacaaaaggactcc
gtctgcggtgtgtctgagtgcatcattatggggattccgatgaatattggaacaggactg
tttaaactcctgcacaaggctgacaaggatccctccccagtcaaaaggcctctcctcttt
gacactccagactttcatatacctctgatcacatag
DBGET
integrated database retrieval system
