Amphiprion ocellaris (clown anemonefish): 111570028
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Entry
111570028 CDS
T06018
Symbol
cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111570028 (cacna1h)
04020 Calcium signaling pathway
111570028 (cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111570028 (cacna1h)
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111570028 (cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GRP
DUF3043
Motif
Other DBs
NCBI-GeneID:
111570028
NCBI-ProteinID:
XP_023128313
LinkDB
All DBs
Position
Unknown
AA seq
1860 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVTCQSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCY
LGDKWNQLDFVIVMAGVMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLGEDIRTMYNLSINPYYMSEEGEDS
PFICSAPRENGMLRCHDVPAFTEGKAECSLAAPHQSSALVGPSPTESGADVNGCVNWNQY
YNVCRPGQLNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLI
IVGSFFMINLCLVVIATQFSETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRY
ISHLYRKLTRRLQRIYSGWHSKRRKKVNPNGSGGGNNGGGNGHGHSSSRGCGGSGPSNAL
WLRPIHNLLQHHQHQHCRLSNGGQHPISVATAEHMDRGGRVGGGEELEMKSLSVRRGSAN
GNSSDSPTVVTQGMGALLGRLNGGMNYPTILPSFVCSYSSKTPPPHSKQCGPSPEQHPPN
HPASEHAETLNKLYQLMGQHSRQRLLYQLAGVVPSPLLLELLSCPLCARSLETLELELGD
LEGGKGEADGLHDFPQGLDLRGGRVRRRRRVVEFKNGAVQAWIHFRDKLRRIVESKYFNR
GIMIAILVNTLSMGIEYHEQPEELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPY
NIFDSIIVIISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVAT
FCMLLMLFIFTFSILGMHLFGCKFSLQTENGDTIPDRKNFDTLLWAIVTVFQILTQEDWN
VVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDDKKSDN
FDEDEKVEQLRDNELKMYSLMMTANGHIDPRVSTAPPIIMRTAATPMPTPKSSLGPESIL
GEDLMYREGVPQYSEMGLGFSEAGNGHAESRRGSSASLEPLAYDQRSLGLSSPGRRSPLP
PRGSGSSWGSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGGEEEDGRDDKDEAEVNNRL
RPGSLELLQASTLCPSIIAEYGDCNGRTVTYDPNMNSDSKDDSSPEDDMDDDGPFCYWVK
KEFHNMKPHWCKEHEDWTLYLFSPESPFRVWCQAVISHKIFDHVVLVFIFLNCITIALER
PDIQPHSTERVFLSVSNYVFTVIFLAEMTVKVVALGFCFGKQSYLQSSWNILDGLLVFVS
LVDILVSLAYTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVL
ICCAFFIVFGILGVQLFKGKFYHCEGLDTKNITNKSDCLQANYRWIRRKYNFDNLIQALM
SLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVV
ENFHKCRQDQEEEEARLREEKRLKMIEKKRRSKENGGAEAKQRPYYADYCPLRLYIHTLC
TSHYLDLFITFIICINVFTMSIEHYNQPQYLEEVLKYCNYVFTIIFVIEALLKLVAFGIH
RFFKDRWNQLDIAIVALSIMGITLEELKMNAALPINPTIIRIMRVLRIARVLKLLKMATG
MRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNDNNPCEGLSRHATFENF
GMAFLTLFRVSTGDNWNGIMKDTLRECHPDDRHCLSYLPLVSPIYFVTFVLMAQFVLVNV
VVAVLMKHLEESNKEAKEDAEMDAEIALEMAMERERRLSTTSNNSSVAGTYVGPCPNSPG
EEEEVQFDDQDQLSSGKMSVSRMHSLPNDSYMFRPVRPASAPYPLEELDLSPQHQHSVRI
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgtgtgactctggggatgtttcagccctgcgaggacgtt
acctgccagtcagagtggtgccgcatcctgcaggtgttggacgactgcatctttgcattc
tttgcggtggagatggtcatcaagatggtggccctgggaatatttggccccaactgttac
cttggtgacaagtggaaccagcttgactttgtcattgtcatggcaggggtgatggaatat
tctctagatggccacaatgccagtctgtcagccatccgaactgtccgagtgctcaggcca
ctgcgggcgattaacagagtaccaagtatgaggatcttggtgacgctgctgctggacacc
ctgcccatgctgggaaacgttctcctcctctgcttctttgtctttttcatcttcggcatt
gtgggagtccagctgtgggcgggactgctccgcaaccgctgcttcctgggagaggacata
agaacaatgtacaacctgtctataaatccttactacatgtctgaggagggtgaagacagc
ccgtttatctgctcagctccccgagagaacgggatgctgcgctgccacgatgtgccagcc
ttcacggagggcaaggccgagtgctcactggccgctccccaccaaagttcagctctggtc
ggaccgtccccaacggagagcggtgccgacgttaatggctgcgttaactggaaccagtac
tacaacgtctgtcgccccgggcaactcaaccctcacaagggagctgtcaactttgacaat
attggctacgcttggatagccatattccaggtcatcacactggaaggatgggtagatatc
atgtactatgtcatggacgctcactccttctacaattttatatattttatactgctcatt
attgtgggctctttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttctcc
gagacgaagcaaagggagaacgccctgatgagggagcagcgcgctcgctacatgtccaac
gactccacactcgccagttacagcgaacccggttcttgctacgaggagatgttgcgctac
attagtcacctttaccgcaagttaacccgcaggctgcagaggatatactctggatggcac
agtaaacggcgcaaaaaggtgaaccctaatggcagtgggggaggcaataacggtggtggt
aatggacacggccacagttcgagcagaggctgcggaggctcaggccccagtaacgcatta
tggttgaggccgatccataacctcctgcagcaccatcagcaccagcactgtcgcctcagc
aacggcgggcagcaccccatcagcgtggcgaccgctgagcacatggacaggggaggacgt
gtgggaggaggggaggaactggagatgaagtcgctttctgttcggagaggaagcgcaaat
ggaaatagcagcgacagcccgaccgtggtcacccagggcatgggggcgttgctggggcga
ctcaacggggggatgaactatccgaccatcctgccatcatttgtgtgcagctacagcagc
aagacgccgcctccccactcgaagcagtgtgggcccagtccggagcagcatccaccgaac
cacccagcgtccgaacacgcagagacactgaacaagctttaccagctgatggggcagcac
agccgacagaggctgctgtaccagctggcgggcgtggtgcccagccccttgctcctggag
ctgctcagctgccccctgtgtgctcgcagcctggagaccctggagctggaactgggagac
ctggagggaggcaagggtgaggcggacggactgcacgacttcccccaggggctagaccta
agaggaggcagagttcgcagacggcggagagttgtggagttcaaaaatggagccgttcag
gcctggatacactttagagacaagctgaggaggattgtggagagtaaatacttcaaccga
gggatcatgatcgctatccttgtcaatactctcagcatggggatagaataccacgagcag
cccgaggaattgactgatgtgttggagattagtaacattgttttcaccagtatgtttgtg
ctggagatgggcttcatgctgctggcttttggcctgtttggatacatcaggaacccatac
aacatcttcgacagcatcatcgttatcatcagtgtgtgggagataatcggtcaagcggat
ggtgggttgtcagtcctgcgaacgtttcgtctgctgcgagttctgaagcttgttcgcttc
ctgccggccctgaggagacaactggtggtgctgatgaagaccatggacaatgtggctacc
ttctgcatgctgctgatgcttttcatcttcacgttcagtatactgggcatgcatcttttt
ggttgtaagttcagtcttcaaactgagaatggagacaccatccctgaccgcaagaacttt
gacactctactctgggccatcgtcactgtattccagattctgacccaggaggactggaac
gtggtgttgtataatggcatggcttctacctctccatgggcggctctctactttgttgct
ctcatgacattcggcaactatgtgctcttcaatttgctggtggccatcttggttgagggc
ttccaagctgagggtgatgctaatcggtcagagtcagatgatgacaagaaatcggataac
tttgatgaggacgagaaggtagaacaactcagagacaatgagctgaagatgtactctctg
atgatgacagctaatggtcacattgaccctcgtgtctccacggctcctcccataatcatg
cgcacagcggccacgcccatgcccaccccgaagagctccctaggacccgagtccatcctg
ggggaggatctcatgtacagagagggggttcctcagtatagcgagatggggctgggattt
tctgaggcaggaaatggacatgcagagtctcgccgtggaagctcagcgtccctggaacct
ttagcctatgatcagcgctctctgggcctctctagtcccgggcggcgctctcctcttcct
ccgcgtggttcgggcagctcgtggggaagccggcgctccagctggaacagcctgggaaga
gctccgagcctcaaacggcgagacaccagcggtgagagggagagtctgctgtctggggaa
ggtggagaggaggaggacggcagggacgataaggatgaggctgaggtgaacaacagactg
aggccggggtccttggagctgctgcaggcgtctactctctgcccttctataatagcggag
tacggcgactgtaacgggaggactgtgacttacgacccgaacatgaactccgactccaag
gatgactcctcgcctgaggacgacatggacgatgacggtcctttctgctactgggtcaag
aaagagttccataacatgaaacctcactggtgcaaagaacatgaagactggacgctgtac
ttgttctctccagaaagcccattccgtgtgtggtgccaagctgtgatctctcacaaaata
ttcgaccatgtggttttggttttcatcttcctcaactgcatcaccatcgctctggaaaga
cctgacatacagcctcacagcacggagcgagtgtttctgagtgtgtccaactacgttttc
actgtgatcttcctggcagagatgaccgttaaggttgtagctcttggtttctgctttggg
aagcagagctacctccagtccagttggaacattctggatggtttattggtgtttgtgtct
ctggttgacattttggtctctctggcgtatactggcggaaacaggatcctgggaattctc
agagtccttcgcctactacgaacacttcgcccactcagggtgatcagtcgagccccaggt
ttgaagctggttgtggagactcttatcacctctctcagacctatcggaaacatcgtcttg
atctgctgtgccttcttcattgtctttggcatcttgggggttcagctgttcaaagggaag
ttctaccattgtgaaggtctagacacgaaaaacatcacgaacaagtctgactgtctccaa
gccaactaccgctggatacgaagaaagtacaacttcgacaacctgattcaggctctgatg
tctttgtttgtactgtcgtgtaaggacggctgggtcaacatcatgtacgacgggctcgat
gcagtgggagtggaccaacagcctgtaagaaaccacaacccatggatgctcctctacttc
atttccttcctactcatcgtcagcttcttcgtcctcaacatgttcgtcggtgtcgtggtg
gagaacttccacaagtgccgacaggaccaggaagaggaggaggcccgattgcgggaagag
aagaggctcaaaatgatagagaaaaagcgcaggagtaaggagaatggaggggctgaggcc
aagcagaggccctactatgccgactactgtcccctgcgtctgtacatccacacactgtgc
accagccactacctggacctcttcatcaccttcatcatctgcatcaatgtcttcacgatg
agcatcgagcactacaatcagccacagtatttagaggaggttctgaagtactgtaactac
gtgtttaccatcatctttgtcatcgaggccctgctcaaacttgtggcgttcggcatacac
aggttcttcaaagacaggtggaatcagctggatatagccatagtggcattgtccatcatg
ggcatcaccctggaggagctgaaaatgaatgcagcactgccaataaatcctaccatcatc
agaatcatgagagtactcaggatagcacgagtgctgaaacttctgaagatggccacgggg
atgagagctctgctggataccgtcatgcaggcgctgccgcaggtgggaaatcttggtctc
ctcttcatgctgctcttcttcatctatgctgctctaggagtggagctgtttggcaaactg
gagtgcaatgacaacaatccatgtgaaggtctgagtcgtcacgcaacctttgagaatttc
ggaatggccttcctcacactgttccgagtgtccactggagacaactggaatgggattatg
aaagacacattaagggagtgtcacccagacgaccgccactgtctctcatacctgcctttg
gtctctccaatttacttcgtcacctttgtcctcatggcccagtttgttctggtcaatgtg
gtggtggctgttctgatgaaacatctagaggaaagcaacaaggaagctaaagaggatgca
gagatggatgcagagatcgccttggagatggcgatggagagggaacgcagactaagcaca
acttcaaacaacagctcagtggcaggaacctatgttggaccatgcccaaattcacctgga
gaggaagaagaggtgcagtttgatgaccaggaccagctgtcatcagggaagatgtctgta
tccaggatgcactcgctacctaatgacagttacatgtttcggcctgtacggcccgccagc
gccccctacccattggaagaattagatctcagcccccagcaccagcattcagtcagaatc
taa
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