Amphiprion ocellaris (clown anemonefish): 111583748
Help
Entry
111583748 CDS
T06018
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04210
Apoptosis
aoce04218
Cellular senescence
aoce04620
Toll-like receptor signaling pathway
aoce04621
NOD-like receptor signaling pathway
aoce04622
RIG-I-like receptor signaling pathway
aoce04623
Cytosolic DNA-sensing pathway
aoce04625
C-type lectin receptor signaling pathway
aoce04920
Adipocytokine signaling pathway
aoce05132
Salmonella infection
aoce05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111583748 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111583748 (nfkb1)
04218 Cellular senescence
111583748 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111583748 (nfkb1)
04621 NOD-like receptor signaling pathway
111583748 (nfkb1)
04622 RIG-I-like receptor signaling pathway
111583748 (nfkb1)
04623 Cytosolic DNA-sensing pathway
111583748 (nfkb1)
04625 C-type lectin receptor signaling pathway
111583748 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
111583748 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111583748 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
111583748 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111583748 (nfkb1)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
111583748 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
111583748
NCBI-ProteinID:
XP_023148733
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MAGDDPYLHTSNQMFDIIDSSWDFPHFPVMSTSSLRTVDGPFLQILEQPKQRGFRFRYGC
EGPSHGGLPGASSEKNRKTYPTVKICNYQGQARVVVQLVTALTPLPQLHAHSLVGKQCDK
GICIADLQSKDSSISFPNLGILHVTKKNVAKTLEERMVEAFRMGHNCGVSIHPEIDALRG
EVRVPRELSDQQRGVIGSAASLQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSEPIY
DSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDDSGLTWEALGDF
SPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQ
RKRQKTLPNFQDFSGHGGGGGLYRGGGGGPAAGGGPGSTGGGGYYQGFTPYSYGVGGAGG
GGFSTGYSAGLGGGGGGIKHTSQGDAADDSGDDSDPDDDSASGVVLRGSDQTGDVEVGQR
MEDGGDGMEPEPEPEPVCDAEECLQQVSSRQLQALFQYSVTGDSAYLLAPQRPLMVAQDE
DGDTGLHLAVLHNQQEALKSLTQVVSALPGEEVLNMRNHLYQTPLHLAVITQQREAVEAL
LLAGADPTLADRHGNTALHLAAQRDGGRDTIQVLLRHRDKRELLQLSNTAGLCAIHLAVL
ANQLSGLRELLEGGADVEVQERSSGRTALHLATEADNVSLAGCLLLEGNAQVDCCTFNGS
TPLHIAAGRGSMKLTALLMAAGADPQKENFEPLFFREEEEDEEDEGYIPGLTPVNMATTS
QVLDLLNGKEYEPKGPHRAFIPPQGDLASLAVEVKQEVCGALESEGLWENLAHSLGLGIL
NTAFRLSPSPAKTLLDSYEVSGGTIRDLLAGLRSVGECRALGVLEGALRGNQETPPPTDE
TTGEAPVAQVQDLKGDVQIDSGVCDSGVELSTA
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggctggagacgacccctaccttcacacctccaaccagatgttcgacatcatcgattcg
tcgtgggattttccacattttcctgtgatgtccacgtcgtctctgcgtacagtagatgga
ccgttcctgcagatcctggagcagcccaaacagcgtggcttcaggttcaggtacggctgt
gaaggtccgtctcatggaggcctgccgggagcctccagcgagaagaacaggaagacctac
cccaccgtcaagatctgtaactaccagggtcaggcccgggtggtggtccagctggtcacg
gcgctgacccccctccctcagcttcacgctcacagcctggtgggaaaacagtgcgacaaa
ggaatctgcatcgccgacctgcagtccaaagactccagcatcagcttccccaacctgggg
atcctccacgtgaccaagaagaacgtggcgaagaccctggaggagcggatggtggaggcc
ttcaggatgggacacaactgtggagtctccatccaccccgagatcgacgccctgcggggg
gaagtccgagttcccagagagctgagcgaccagcagcgaggcgtgatcggcagcgcggcg
tctcttcaggccaaagaaatggacctcagcgtggtccggctcatgttcacggcgttcctg
cccgacagcgacggaggtttctccaggaggctcgagccagtcgtctcggagccgatctac
gacagcaaggctccaaacgcctctaacctgaagatcgtgaggatggatcggaccgccggc
tgtgtgacgggaggagaggaggtttacctgctctgtgacaaagtccagaaagacgacatc
caggttcggttctacgaggaggatgactcgggtttgacctgggaggctctgggagacttt
tcccccacagacgtccacagacagttcgccatcgtctttaagacgccgaagtatcgagat
cagaacctgcagaaaccgacgtctgtgttcgtccagctgaagaggaagtctgacaacgag
accagtgaacccaaacccttcacctaccaccctcagattatagataaggaggaggtccag
aggaagaggcagaagacgttgccgaactttcaggacttcagcggtcatggagggggagga
ggtttataccgaggaggaggaggagggccggctgcaggaggaggaccaggatctactgga
ggaggaggatactaccagggcttcactccctacagctatggagtaggaggagcaggagga
ggaggcttctccacaggatactcagctggtctgggaggaggaggaggaggcatcaaacac
acctctcagggcgacgcagcagacgacagcggtgatgacagtgatccagacgacgactct
gcgtcgggcgtcgtcctgcggggttcagaccagacaggagacgtggaggtggggcagagg
atggaggacggaggggacggtatggagccggaaccagaaccagaaccagtgtgtgatgct
gaggagtgtctgcagcaggtgagcagccgacagcttcaggctctgttccagtactctgtt
acaggtgactcggcctacctgctggctccacagcgccccctgatggtggcgcaggacgag
gacggagacacagggcttcacctggccgtcctccacaaccagcaggaggcgctgaagagt
ctcacccaggtagtttctgctctgcctggagaggaagtgctcaacatgaggaaccacctg
taccagactcctttgcacctggcggtcatcactcagcagagggaggcggtcgaagcgctc
ctattggccggagccgacccgactctggccgaccgtcatggcaacacggcgcttcacctg
gcggcgcagcgggacggaggaagagacacgatccaggttctactgagacaccgagacaag
agagaactgctgcagctcagcaacacggcaggtctgtgtgcgatccacctggctgtcctg
gccaatcagctgtcaggtctcagggagctgctggagggcggagccgacgtggaggttcag
gaacgcagcagcggtcggacggcgcttcacctagcaacagaggcagacaatgtgtcattg
gccggatgtctgctgctggagggaaacgcccaggtggactgctgcaccttcaatggctcc
acccccctccacatcgctgcaggtagaggctccatgaagctgacggcgctgctgatggct
gcaggtgcagatcctcagaaggaaaactttgagccgctgttcttcagggaggaagaggag
gatgaagaagatgaaggctacatcccaggactgaccccagtcaacatggccaccaccagt
caggttctggatcttctgaacggtaaagagtacgaacctaaaggtcctcacagagccttc
atccctcctcaaggcgacctggcgagtctggccgtggaggtgaagcaggaagtgtgtggc
gctctggaaagtgaaggattgtgggagaatctggctcacagtctgggtctggggatcctc
aacacggcttttagactcagtccttcacctgccaagaccctgctggacagctacgaggtg
tcaggggggaccatcagggacctgctggctggtcttaggtcagtgggagagtgcagagcg
ctgggtgtcctggagggggcgctgcgtggcaaccaggaaacaccgccgccgaccgacgag
acaacaggcgaggctccggtcgcgcaggtccaggacctgaagggggacgttcagatcgac
agcggcgtctgcgacagcggggtggagcttagcacggcgtag
DBGET
integrated database retrieval system
