Amphiprion ocellaris (clown anemonefish): 111586645
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Entry
111586645 CDS
T06018
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111586645 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111586645 (polr1b)
Enzymes [BR:
aoce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111586645 (polr1b)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111586645 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
111586645
NCBI-ProteinID:
XP_023152182
Ensembl:
ENSAOCG00000004249
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MDSSVKWRNLTKCVSLKNLTDGGFGDLKEQQHAAVQDLTRAHIESFDQAVTVGLSRVVQA
IPPLEFTFKNDRISLVFVDATMYSPVVAKGSICKEMKVFPAECRGRRCSYKGKLVADISW
SVNGVPKGIIKQAMGQVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKACVSEMLRIVMEEGCTTRSKV
LNHLGERFRVKMNLPEWYTNEQCANFLLDECICIHLRSPIEKFYLLCLMTRKLFTFAKQE
CMEENPDSITCQEVLTPGQLYLMFLKEKLTAWLVSVKLSFDKRGSKLAAGCTTENVMKMF
NTGSDLTKPFEYLLATGNLHSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTLSTITLPALLCSLGVT
PVDGTPGQAFSDCYPVVLDGAVVGWVEADLAPAVADSLRTFKVLREKKIPPWTEIVLVPK
TGKASLYPGLYLFTTPCRMMRPVQNLALGKQESIGTFEQLYMNVGIFEGEIEPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWDRGFAHGSIYKTELVD
LADKVRGEDSVVFGTKPGDPKVNDRLDADGLPYIGSTLKYGDPFYGYINLNTGQSFVTFY
KSQESCVVDNIKICSNDTGSGSFKRVCITVRVPRNPTIGDKFASRHGQKGILSCLWPAED
MPFTESGMMPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALDY
FGEMLRAGGYNYYGTERLYSGISGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPLYWSATRHRKTVCTLCGKSDTIDSVSVPYVFRYFIAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggactcctcagtcaagtggcgtaatttgacaaaatgtgtgagtctgaaaaatctgaca
gacggagggtttggcgacctgaaggagcaacaacatgctgctgttcaggacctaaccaga
gctcacatcgagtcgtttgaccaggctgtcactgtcggactcagccgcgttgtgcaggcc
atccctcccttggagttcacattcaaaaatgacaggatcagccttgtatttgttgatgcc
accatgtacagcccagtagtcgccaaagggagtatttgcaaagaaatgaaggttttccct
gcagagtgccgtggaagacgatgttcatacaaaggaaagcttgtggcagatatcagctgg
tcagttaacggtgttcccaaaggcatcatcaagcaggccatgggtcaggttccaatcatg
gtgaagtccaagctgtgtaacctgcatggcatgtcccctaaagaacttgtagaacatcat
gaagaagccgaggaaatgggaggttatttcattgtgaatggaattgagaaagttatccga
atgctgattatgccaaggaggaactatcccattgccatgtcaagacctaagtggaagagc
aggggtcagggatacactcagtatggtatttcaatgcgttgcgtgaaggaagaacacaca
gcgattaacatgaaccttcattatctggaaaatggcactgtgatgttgaacttcatctac
cagaaagaactcttcttcctgccactaggctttgcactgaaggccctggtggacttcaca
gactttcagatctaccaggaactgattaaaggtcgtgaggacaattctttttacaaggcg
tgtgtgtctgaaatgctgcgcattgtcatggaggagggctgcaccacccgcagcaaggtt
ctcaatcacctcggagaacgcttcagggttaagatgaaccttccagagtggtacaccaat
gaacagtgtgccaacttcctgttagatgagtgcatctgcatccatctgaggtctcccatc
gagaagttctacctgctgtgtctcatgaccaggaagcttttcacatttgccaagcaggag
tgcatggaagaaaatcctgacagcattacatgtcaggaagtgctgactcctggccagctc
tacctcatgtttctgaaggagaaactgactgcgtggttggtgtctgtgaagttgtccttt
gacaaaagaggcagtaaactggctgcaggatgtaccactgagaatgtgatgaagatgttc
aacacaggctctgatctgactaagccctttgaatatctgctcgctactgggaacctccac
tccaagacaggtcttggcatgctgcagaacaccggcctgtgtgttgtagcagacaagctg
aacttcatccgatacctgtcccacttccgctgtgtgcacagaggagcagctttcgccaag
atgaggaccacttctgttcgtaagctgctgcccgagtcttggggcttcctgtgtcctgtc
cacactccagacggagagccctgtggactcatgaaccacatgacagccagctgtgaaatt
gtggcaccaaccctgtccaccataaccctgcctgctctgctctgctctcttggtgttact
ccagtggatggaactcctggtcaagccttctctgactgctaccctgtggtcctggatgga
gctgttgttggctgggttgaggctgacttagctccagctgtagctgactcactgcgcaca
ttcaaggtgctaagagaaaagaagatccctccttggacagagattgttctggttcccaaa
acaggcaaagccagcttatatccaggcctttaccttttcacaacaccctgccgcatgatg
cgacctgtacaaaacttagctcttggcaaacaggaatccatcggcacctttgaacagctt
tacatgaatgtgggaatctttgagggtgagattgaaccaggagtaaccacacaccaggag
ctgttccctcacagtatgctcagtgtggtggctaacttcatcccttactcagaccacaac
cagagccctaggaacatgtaccagtgtcagatgggtaagcagactatgggtttccccctg
cactcttttatggatcgctccgataacaagctgtaccggctccagaccccacagagccca
ctcgtcaggccctatatgtacgaccactacaacctggacaactaccccagcggcaccaac
gccattgtggccgtcatatcctacacgggctacgacatggaagatgccatgattgtaaac
aagtcgtcctgggacagaggcttcgcccatggaagcatctacaagactgagctggtagac
ttggcagacaaggtgaggggagaagacagtgttgtgtttgggaccaaaccaggtgaccct
aaagtgaatgatagactggatgctgatgggctgccttacattggatcaacacttaagtat
ggagaccccttctacggctacattaacctcaacactggccagagctttgtcaccttctac
aagagccaggagtcctgtgtcgtcgacaatataaagatctgcagcaatgacactggttca
ggtagttttaaacgcgtctgcatcactgtacgagtgccacgaaaccccaccattggtgac
aagtttgccagccgtcatggtcagaagggcatcctgagctgcctgtggccagccgaggac
atgcccttcacagagagtggtatgatgccagacatcctgttcaacccccacggcttcccc
tcacgtatgacgatcgggatgctgatagagagcatggccggcaagtctggcgccctgcac
ggcctgagccacgatgccacacccttcaccttctctgaggagaactctgcactcgactac
ttcggtgaaatgctccgggcaggcggctacaactactacggtactgagcggctctacagt
ggaataagcggtcaggagctggaggcggacatcttcatcggcgtcgtctactaccagcgg
cttcgtcacatggtctctgacaaatttcaagtgaggaccacaggagcgcgagacaaggtg
accaaccagcctgtgggaggaaggaacatccagggaggaatccgttttggggagatggag
cgagatgccctgctggctcacggctcttcattcttgcttcacgatcgcctcttcaactgc
tcggaccggtcagtggctcaggtgtgcgttgactgtggcagccttctttcccctctgttg
gagaaacctccactgtactggtcggccacgcgccaccgcaagactgtctgcactctgtgc
ggcaaaagtgacactattgactcagtgtctgttccttacgtcttccgctacttcatagcg
gagctcgcagcaatgaacatcaaagtcaaactggatgttaagtga
DBGET
integrated database retrieval system