KEGG   Asparagus officinalis (garden asparagus): 109820641
Entry
109820641         CDS       T05243                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B-like isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03020  RNA polymerase
aof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109820641
  09124 Replication and repair
   03420 Nucleotide excision repair
    109820641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109820641
   03400 DNA repair and recombination proteins [BR:aof03400]
    109820641
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109820641
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109820641
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C zf-LSD1 Elf1
Other DBs
NCBI-GeneID: 109820641
NCBI-ProteinID: XP_020242408
LinkDB
Position
8:122372909..122377026
AA seq 119 aa
MSTMKFCCECNNILYPKEDRQQKILLYACRNCDHQEPADNNCVYRNVIHHSADEFTQVLQ
DVAADPTLPRTKSVRCAVCNHPEAVFFQVTSLSQSQYFFCLIYCGVIVTINENYIILTT
NT seq 360 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgctgtgaatgcaacaatatcttgtacccaaaggaggacagg
cagcagaagatcctcctttatgcctgtcgcaactgcgatcatcaggagcctgcagacaac
aattgtgtgtatagaaacgtgattcatcattctgctgatgagtttacacaagtcctacag
gatgttgcggctgatccaactcttcctcgtactaagagtgttcggtgtgctgtatgcaat
caccccgaagccgtattcttccaggtcacatcactttctcagtctcaatattttttttgt
ttaatttattgtggtgtaatagtaactataaatgaaaattatatcatacttacaacatag

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