Asparagus officinalis (garden asparagus): 109836649
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Entry
109836649 CDS
T05243
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof02010
ABC transporters
aof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109836649
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109836649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aof02000
]
109836649
Enzymes [BR:
aof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
109836649
Transporters [BR:
aof02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
109836649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_29
AAA_21
AAA_23
AAA_16
SMC_N
nSTAND1
Mg_chelatase
DUF815
AAA_30
Motif
Other DBs
NCBI-GeneID:
109836649
NCBI-ProteinID:
XP_020260209
LinkDB
All DBs
Position
4:12533056..12576972
Genome browser
AA seq
1342 aa
AA seq
DB search
MPSLQLLPLTEHGRNIFASRRRTLVTVTGALVAGGTVAYLRSRHQKRLIRPDSSASDVAS
ESGKGKLSQNGVDDKSIRKSRRKRSGLKSLHVLAAILLSQMGRNGMRNLMALVATVVMRT
ALSNRLAKVQGFLFRAAFLRRVPTFLRLIIENLLLCFLQSTLFSTSKYLTGALGLRFRKI
LTDLIHADYFENMAYYKISHVDDRITNPEQRIASDIPKFCSELSDLVQEDLTAVTDGLLY
TWRLCSYASPKYVLWILAYVIGAGSVIRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAE
SVAFYGGENRESSYIKKKFKTLIRHLNLVLHDHWWFGMIQDFLLKYLGATVGVVLIIEPF
FGGNLRSDSSTIGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELML
VSRELSEVHEKTSIQKNSSRNYISEANYIEFAGVKVVTPTENVLVDNLTLRVESGSNLLI
TGPNGSGKSSLFRVLGGLWPLVSGHIVKPGIGSDLNKEIFYVPQRPYTAFGTLRDQLIYP
LTADQETEPLTHEGMVELLKNVDLEYLLERYPLDKEINWGDELSLGEQQRLGMARLFYHK
PKFAILDECTSAVTTDMEERFCSKVRAMGTSCITISHRPALVAFHDMVLSLDGEGGWSVQ
SKRDYLQYPSERDPNLLKSSETDRQSDALAVQRAFTAAGKINTFPNSKELSYSTELIASS
PILEHKVSLPIVPQLKNTPRALPLRVSAMFKVLVPRLLDKQGAQLFSVALLVVSRTWISD
RIASLNGTSVKYVLEQDKAAFVRLTGISVLQSAANSIVAPSLRSLTSRLALGWRIRLTHH
LLENYLKNNSFYKVFHMSGKDIDADQRITHDVEKLTTDLSSLVTGMVKPSVDILWFTWRM
KLLTGRRGVAILYAYMLLGLGFLRSVAPEFGDLASREQQLEGTFRFMHSRLRTHAESVAF
FGGGSREKAMVDSRFKELLNHSKILLRKKWVYGILDDFITKQLPHNVTWGLSLMYAMEHK
GDRALTSTLGELAHALRFLASVVSQSFLAFGDILELHRKFLELSGGINRIFELEELLAAA
QNDIPLCDASVSYDENGTHPQDIISFSNVDIITPSQKLLARQLTCEIVQGQSLLLTGPNG
SGKSSMFRVLRGLWPVVSGKLMKPCQNTDEEMGQHCGMFYIPQRPYTSLGTLRDQIIYPL
SREEAEKRMLKIVEKGGDSDASHLLDDRLRSILENVRLVYLLERDEQGWDACPNWEDVLS
LGEQQRLGMARLFFHNPKFGILDECTNATSVDVEEHLYRLAKEMGITVLTSSQRPALIPF
HSMELRLIDGEGRWELCSIINQ
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcagttattgccactgacagagcatgggcgaaatatatttgcctccaga
aggagaacacttgttacggtcacaggtgctctagttgctggtggaaccgttgcatacctg
aggtctagacaccagaaaaggttgatcagacctgactcttctgcttctgatgttgcatct
gagtctgggaaaggaaaattgagtcagaatggtgttgatgacaagtccatcaggaagtca
agaaggaaaaggagtggattaaaatctctacatgttttagctgctatcctactttcccag
atgggaagaaatggcatgcgcaatctcatggctttagttgctacagtggttatgagaacc
gccttgagtaatagactggcaaaagtgcaagggttcttgtttcgagctgcttttctacgg
cgtgtaccgactttcttacgcctaatcatcgaaaatcttctcttatgttttctccagtcg
acattattttccacttcaaaatatttgacaggggccttaggtttgcggttcagaaaaata
ttgacggatctcatacatgctgattattttgagaatatggcgtactataaaatatcacat
gtagatgacagaatcactaacccagagcagcgcattgcgagtgatataccaaaattttgt
tcagaattgagtgatcttgtacaggaggatctcactgcagtcacagatgggctgctctat
acctggcgcctctgttcttatgcaagtccaaaatatgtgctctggatactggcatatgta
ataggggcagggtccgtgattaggaacttctcccctgcattcgggaaattgatgtccaag
gagcagcagttagaaggggaatatcggcagcttcactcacggctaaggacccatgctgaa
agtgttgcattttatgggggagagaatagagaatcttcctacatcaagaagaagttcaaa
actcttattaggcacttgaatctcgttcttcatgaccattggtggtttggaatgattcaa
gatttcttattgaagtatctcggtgccacagtgggagttgtcctgatcattgaaccattt
tttggtggcaatctacgatctgattcttcaacaataggaagagcagagatgttgagcaat
ctccgttatcatacaagtgttataatttctctttttcagtctcttgggactctctctatc
agctccagacggttaaatagactcagtggttatgctgaccgtattcatgagctaatgctt
gtttcaagagaattatctgaggtgcatgaaaaaacatcaattcagaagaactcaagcagg
aattatattagtgaagctaattatatcgagtttgcaggtgtcaaggtagtaacaccgaca
gaaaatgtattagtggacaacttgactcttagggtggaatctggttctaaccttttgatc
accggacctaatggaagcgggaaaagctcccttttccgagttcttggaggcctctggcca
ttggtgtctggccacatagtgaaacctgggattggttctgatctcaataaggaaatattt
tatgtgccacaacgcccatatacagcttttggaacactccgtgatcagctaatttatcct
cttaccgcagatcaagagactgaaccacttacccatgaagggatggttgaactgttgaaa
aatgttgaccttgagtacttgctggaacgttatccgttggataaggaaataaactggggt
gatgaactttctctgggcgagcaacagaggctgggaatggccaggctattttatcataag
cctaagtttgctattttggatgagtgtacaagtgctgttacaactgatatggaggaaagg
ttctgttctaaggttcgggcaatgggcacatcatgcattactatatcacaccgccctgca
ttagttgcatttcatgacatggttttgtcattagatggagaaggaggatggagtgttcag
tctaagagggattatttacaatatcccagtgaaagggatcctaatttgttaaaatcatca
gaaactgatcgtcaaagtgatgctctagctgttcagagagcttttactgctgccggaaag
ataaatacctttcctaattccaaagagctttcttattcaacggagctgatagcatcatct
cctatcctagagcacaaagtttctttgcccattgttccacaacttaaaaatactccaagg
gcattgcctttaagagtttctgcaatgtttaaagtgctggtgccgaggctgctagataaa
cagggtgcacagttgttttcagttgccttacttgtagtatccaggacatggatctcagat
cgcatagcttctttgaatggtaccagcgttaaatatgttttggaacaagataaggctgca
tttgttagattaacgggtataagtgttcttcaaagtgctgcaaactccattgttgcacct
tctctgaggtctttgacatcaaggctcgcacttgggtggcgaattcgtttgactcatcat
ctacttgagaattatttgaaaaataattctttttataaggtgttccatatgtcaggcaaa
gatattgatgccgatcagaggataacacatgatgtggaaaagttgacaactgatctgtca
agtttagttactgggatggtaaagccttctgttgacatcctctggttcacttggagaatg
aagttgttgactggccgaagaggagttgctatattgtatgcttatatgttattgggttta
ggttttttgagaagtgttgctcctgaatttggtgacttagcgagcagagaacaacaactt
gaaggaacatttaggtttatgcattcaaggctccgtacacatgctgaatctgttgctttc
ttcggtggtggttctcgagaaaaagctatggtagattcgagattcaaggaattgctcaat
cattctaagatcttattgagaaagaagtgggtttatggtatcctggacgacttcatcaca
aagcagctccctcataatgttacatggggactgagtttaatgtatgcaatggagcataaa
ggagaccgtgctttaacttctacactaggggagctggcacatgcactgcgctttttagcg
tctgtggtatcacaaagctttctagcatttggtgacattcttgagttgcacagaaagttt
cttgaactttctggtggaataaatcgtatatttgagcttgaggaacttcttgctgctgcc
caaaatgatattcctctatgtgatgcttctgtgtcctatgatgaaaatggcacacatcca
caggatattatctccttctctaatgttgatatcatcaccccatcacagaagctgttagct
aggcagttaacatgtgaaattgtgcaaggacaaagcctcctccttactggacctaatggg
agtgggaagagctccatgttccgagttctccgaggtttgtggcctgtcgtaagtgggaaa
cttatgaaaccctgccaaaatactgatgaagagatgggacaacattgtggcatgttctac
attccacagcggccttacactagtttgggaaccctgagggatcaaataatttaccctctc
tcacgtgaagaagctgagaagaggatgctaaaaattgttgagaaaggtggtgattctgat
gcttcccatcttttggatgatcgtctgaggtctattcttgagaatgtccgattagtttat
ctccttgaacgagacgagcaaggttgggatgcttgtcctaactgggaggacgtgttatct
cttggtgaacagcagagacttggcatggcccgcttgttctttcacaaccccaaatttggc
atcctggatgagtgcaccaatgccaccagcgttgatgttgaagaacacctatacagactt
gcgaaagaaatgggcatcacagttctgacatcctctcaacgacctgctctaataccgttt
cactccatggaattgcgactgattgatggcgaggggagatgggagctatgttcaatcatc
aaccagtaa
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integrated database retrieval system
