Asparagus officinalis (garden asparagus): 109842775
Help
Entry
109842775 CDS
T05243
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109842775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aof02000
]
109842775
04147 Exosome [BR:
aof04147
]
109842775
04090 CD molecules [BR:
aof04090
]
109842775
Enzymes [BR:
aof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
109842775
Transporters [BR:
aof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109842775
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109842775
CD molecules [BR:
aof04090
]
Proteins
109842775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
ABC_ATPase
AAA_16
AAA_21
RsgA_GTPase
AAA_15
Zeta_toxin
AAA_30
AAA_7
DEAD
DUF815
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
109842775
NCBI-ProteinID:
XP_020267245
LinkDB
All DBs
Position
5:4489087..4500150
Genome browser
AA seq
1228 aa
AA seq
DB search
MVVGTFGALGSGAAMSLMAVLFGNLIESFGGDSDMHEVVHRVSEVCLQFLYLAVGSGVAS
FFQVACWTTTGERQAARIRNLYLKTILRQEIAFFDKETNTGEVVGRMSGDTVLIQEAIGE
KIGRFLRLLSGFFAGFIVAFIEGWLLTLVMLTTIPLIVVAGAAMATIISKMASKQQAAYA
EAAVVVEQTIGSIRTVASFTGEKQSVDKYGKSLKSAFEASVQEGLASGLGLGTVMLTMFC
VYSLGLWYGSKLILDRGYTGADVISVIFAVLIGSFSLGQASPCITAFAAGRAAAYKMFET
INRKPEIDASDPKGKKPDGFRGDIEFKDVYFSYPTRQDNQIFRGFSLFIQSGTAVALVGE
SGSGKSTAISLIERFYDPQAGEVLIDGINLKEFRLKWIRGKIGLVSQEPVLFASSIKDNI
SYGKDGATNEEIKAAAELANAANFIDKMPQGLDTMVGEHGTQLSGGQKQRVAIARAILKD
PRILLLDEATSALDAESERIVQEALDRVMANRTTVIVAHRPPIPNTNTHQVLLDNPVFLS
GSHAELLKDPNGAYCQLISLQEMNQTSDQASQAELARSSLSSDGGRHSSQHMSLNHSISH
ELSSIGHSSHHSFSITIGLPVGYDVQDISKSEGRSNEDPAKKAKEISLRHLAYLNKPEIP
VLTIGSISAIVNGTIFPIFGILLSNAITTFYQPPPKMMKDSKFWSKLFLVLGFVSFIGFP
ARTYFFGLAGSRLIRRIRLMTFEKIVHMDVGWFDEPENSSGAIGARLSADAAMVRGLVGD
TLALVVENATTLVAGLVIAFSANWQLTMIVLALLPLIGLNGWIQIKSMKGFSSDAKMMYE
EASQVANDAIGSMRTVASFSAEDMVMELYRTKCEGPMRTGIKQGFISGTGFGASFFVLFC
VYAACFYAGVHLVEDGKTTFGEFFRVFFALSLAAMAISHSSGLAPDSSKAKSATASIFAV
LDLKSAIDSSDNSGMKLETLEGNIEFRHISFKYPTRPDIQIFQDFCLSIQSGKTVALVGE
SGSGKSTAIQLLQRFYDPNSGKISIDGIEISKFQVKWLRQQMGLVSQEPTLFNDTIRANI
AYGKVGETTEAEIVAGAELANADKFICSLQQGYDTMVGERGIQLSGGQKQRIAIARAIIK
EPKILLLDEATSALDAESERIVQDALDRVMVNRTTIVIAHRLSTIRGADIIAVVKNGMIV
EKGKHEALMNIEDGAYASLVALHSSSTS
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgggaacatttggagctctgggaagtggggctgcaatgtctctcatggcagtg
ctatttgggaacttgattgaatctttcggaggagatagcgatatgcatgaggtggttcac
agagtttctgaggtatgccttcagtttctctacttagctgtaggatctggagtagcttca
ttctttcaggtggcttgttggacgacgaccggagagaggcaagctgctagaataaggaat
ctgtacctgaaaacaatattaaggcaggaaatagcattttttgacaaggaaacaaatacc
ggagaagttgttgggagaatgtcaggtgacactgttctcattcaagaagccatcggggaa
aaaattggcaggttccttaggctactgtcaggtttctttgcgggatttatagttgcattt
attgaggggtggcttctaactcttgtaatgctaaccactattcctctgattgtggtggcg
ggggcagcgatggccacaataatatcgaagatggcatcgaaacaacaggcagcttacgca
gaggctgcggtcgtggtagagcagacaattggttcgatcagaacagtcgcatcttttact
ggggagaaacaatctgtagataaatatgggaaatctctaaagagcgcgtttgaggctagc
gttcaagagggtcttgcttcaggactaggccttggtactgtaatgctcaccatgttttgt
gtgtacagtttgggattatggtatggctcaaagttgatattggacagaggctacacaggc
gccgacgtaattagtgtgatatttgcagtcctcattggatccttctctttaggccaggct
tctccatgtataacagcattcgcagcagggcgagctgcagcatacaaaatgttcgaaaca
atcaacagaaagccagagatcgatgcttctgaccccaaaggaaagaaaccggatggcttt
cgaggagatatagaattcaaggatgtttacttcagctatccaacaagacaagataaccaa
attttccgcggattctctctatttatacaaagtggtacggctgttgctttggtcggagag
agcggaagtgggaaatctacagcaataagtctgatagaaaggttttatgatccacaggca
ggtgaagttcttattgatggtataaacctcaaggagttccgtttgaaatggatcagaggt
aaaataggactagtgagtcaagagcctgtactgtttgcttcgagcattaaagacaatata
tcttatggaaaggatggcgcaacaaatgaagagatcaaagctgcagctgagcttgctaat
gctgccaatttcatagacaaaatgcctcagggacttgacaccatggtcggcgagcatgga
actcaattatcaggtggtcagaaacaaagggttgcgattgcaagagccattctgaaggac
cctcggattctacttcttgatgaagccactagtgctttggatgcagaatccgaaaggata
gtgcaggaagcacttgatagagtaatggcaaaccgaactactgttattgttgctcatcgt
ccccccatcccaaatacaaacacacaccaagttttgctagataatcctgtattcttatca
ggttcgcatgcagagctactgaaggatccaaatggagcttattgccaactcataagcttg
caagaaatgaaccaaacttcagatcaagcgtcgcaagctgagctggctagatctagtctt
tcatccgacggagggaggcactctagtcaacatatgtctttgaatcattccatctcccat
gaattatcatctataggccacagcagccatcactctttctcaataacaattggattaccc
gtaggttatgatgtccaagatatcagcaaatcagagggcagaagcaacgaagaccctgca
aaaaaagcaaaggaaatttccctccgacaccttgcctatcttaacaaacctgagatcccc
gtgcttacaattggttcaatctctgccattgttaatggaaccatcttccccatatttgga
attctcctatcaaatgcaataactacattttaccagccacccccaaagatgatgaaggat
tctaagttttggtcgaaactgtttttagtacttggtttcgtttcgttcattgggtttcca
gctagaacatatttcttcggtttagcaggatcgagattgataagaaggatacggcttatg
actttcgagaaaattgtgcacatggatgttggatggtttgatgagcctgagaactcgagt
ggagcgatcggagctagattatcagcagatgcagcgatggtcaggggtctcgttggcgat
actcttgctttggttgttgagaatgcaactactttagttgctggtctggttattgccttt
tctgcaaactggcaattgactatgattgtattggcattgttgcccctcataggacttaat
gggtggattcagataaagtccatgaaaggatttagtagcgatgcaaagatgatgtatgag
gaagcaagtcaagttgcaaatgatgccataggaagcatgagaacagttgcttcattctcg
gctgaagatatggtgatggaattgtatcggacgaaatgtgaaggacctatgaggacagga
attaagcaagggtttattagcggtactggttttggagcatccttctttgtgctcttttgt
gtttatgcagcctgtttttatgctggagttcaccttgtagaggatggaaagactacattt
ggagaattttttagagttttctttgctctttctctggcagccatggcaatttctcactca
agcgggctagcaccagattctagcaaagcaaaatctgccacagcatctatatttgcagtt
cttgacctaaagtctgccatagattctagtgacaattctggaatgaaattagaaactttg
gaaggaaacattgagtttcggcacatcagtttcaagtatcccacaaggccagatattcaa
atcttccaagatttttgcttgtcaattcaatctggaaagactgttgcattggtgggagag
agcggaagtgggaaatcaactgcaatacaattgctacagagattttatgaccccaattca
ggtaagatatcgatagatgggattgagatatcaaagttccaggtgaagtggttgaggcag
caaatgggccttgtcagccaagaaccaacattgttcaatgacactattcgagccaacatt
gcctatggaaaggtaggagagactaccgaggctgagattgttgctggtgctgagttagca
aatgcggacaagtttatatgcagtttgcagcagggctatgacacaatggttggagaacga
gggattcagttatcgggtggtcagaagcaacgtatagcaattgcacgtgccatcataaag
gagcccaagatcttgctccttgatgaagcaactagtgcattggacgctgaatctgaaaga
atagttcaagacgctctagatcgagttatggtcaatagaaccacaatagtcatcgctcat
cgactgtctacaatcagaggtgctgatattattgctgtagttaagaatggtatgattgta
gagaaaggaaagcatgaggctctgatgaatatcgaggatggggcttatgcctccttagta
gcacttcactctagttctacttcataa
DBGET
integrated database retrieval system
