Asparagus officinalis (garden asparagus): 109844198
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Entry
109844198 CDS
T05243
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03008
Ribosome biogenesis in eukaryotes
aof03013
Nucleocytoplasmic transport
aof03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109844198
03008 Ribosome biogenesis in eukaryotes
109844198
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109844198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109844198
03009 Ribosome biogenesis [BR:
aof03009
]
109844198
03016 Transfer RNA biogenesis [BR:
aof03016
]
109844198
03036 Chromosome and associated proteins [BR:
aof03036
]
109844198
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109844198
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
109844198
Pre-60S particles
109844198
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109844198
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109844198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
109844198
NCBI-ProteinID:
XP_020268747
LinkDB
All DBs
Position
6:3106040..3120635
Genome browser
AA seq
1075 aa
AA seq
DB search
MAEKLRDLSKPIDVPLLDATVAAFYGTGSKEERAAADQILRELQSNPDTWLQAVHILQNS
QNLNTKFFTLQVLEGVIKYRWNALPVEQRDGMKNYISDIIVQLSSDEASFRRERLYVNKL
NIILVQILKHEWPARWKSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQK
IKELKQSLNSEFQLVHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLETL
LKFFPVTSYRNLTLQCLTEVAALQFGDFYNMQYVKMYTIFMVQLQTILPPGTNIPDAYAN
GSSEEQAFIQNLALFFTSFYKSHIRILETTSENRAALLLGLEYLISISYVDDTEVFKVCL
DYWNILVLELFESHHNLDTPAATAGMMGFQNTLVSGMVDGLGSSLLQRRQLYAIPMSKLR
MLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMKETLIYLAHLDHEDTEQQML
KKLNKQLSGEDWSWNNLNTLCWAIGSISGSMQEDQENRFLVMVIRDLLNLCEITKGKDNK
AVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKR
KFVITQVGENEPFVSELLSSLANTVGDLEPHQIHTFYESVGHMIQAESEATKRDEYLKRL
MELPNQKWAEIIGEASRSVDILKQQEVIRTVLNILQTNTSVASSLGTFFFPQISLIFLDM
LTVYRMYSELISSSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEEQPHIGKQFV
PPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAVMMEDVPRIFEAVFQCTLEMITKN
FEDYPEHRLKFFSLLRAIATHCFQALYQLSSQQLKLVMDSVIWAFRHTERNIAETGLILL
LEMLKNFQASGFCNQFHRTYFLTIEQEIFAVLTDTFHKPGFKLHVLILQHLFCLVDSGSL
TEPLWDASTVSFPYPNNMVFVRDYTIKLLGSSFPNMTLAEVTQFVDGIFTSRSDLPAFKN
HIRDFLVQSKEFSAQDNKDLYAEEAAAQKERERQRMLSIPGLIAPNELQDEMVDS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagcttagggatctgagcaagccgatcgatgttccgcttcttgatgcgacg
gtggctgcgttttacgggactggatccaaagaggagagagcagcagcagaccagatattg
cgggaattgcaaagcaaccctgatacatggttgcaagcagtccatattctacaaaactca
cagaacttgaacactaagttttttactcttcaggtattagaaggtgttatcaaatataga
tggaatgctttgcctgttgaacaacgagatgggatgaagaactatatatctgatattatt
gtacagctttcaagtgatgaagcctcttttcgtcgggagaggttatatgtcaacaagctg
aacattattttagttcagatattaaagcacgagtggccagctagatggaaaagcttcatt
cctgatcttgtatcagcggctaagactagtgagacaatctgtgaaaattgcatggctata
ttaaagctcctgagtgaagaagtttttgatttctcaagaggagagatgactcagcagaaa
atcaaagaactgaaacagtcattaaacagcgagtttcaacttgttcatgagttgtgctta
tatgtgctctcggcatctcaaagaacagagcttatacgggccacattggcaactcttcat
gctttcttatcatggattcctctgggctatatatttgaatcgccactgctggagactctc
ctgaaattctttcccgtgacatcatataggaatctcacgctccagtgtttaacagaggtt
gctgctcttcagtttggtgacttttataacatgcaatatgttaaaatgtacactattttt
atggtacagctgcagactattctaccacctgggacaaatatacccgatgcttatgcaaat
ggttcgagtgaagagcaggcatttatccaaaatcttgcactgtttttcacttcattttat
aagtctcatatccgcatattggagacaacttctgagaacagagctgcattgctattgggt
cttgaatatttgatcagtatctcctatgttgatgacacagaggttttcaaggtctgtctg
gactattggaacatattagtacttgagcttttcgagtctcaccacaatttggatactccg
gctgcaactgcgggaatgatgggctttcagaatacgttggtttctgggatggtcgatggc
cttggttcgtcgcttctacaacggcgacaactctacgctattccaatgtcaaagctaaga
atgctcatgatatgtcggatggctaagcctgaagaggttttgattgttgaagatgaaaat
ggcaacattgttcgtgaaactatgaaagacaatgatgttcttgttcagtataagatcatg
aaggaaacgttgatatacttggcacatcttgatcatgaagacactgaacagcagatgtta
aagaagttaaataaacaattgagcggggaggattggtcctggaataacttgaacacttta
tgctgggctattggatcgatatctgggtctatgcaggaggatcaggagaacaggtttctt
gtgatggtcattcgtgacttgctgaatctctgtgaaatcacaaaagggaaagacaacaaa
gcggttattgccagtaacatcatgtatgttgttggacagtatccaaggtttctcagggct
cactggaagttcttgaaaacagtggttaataagctgtttgagttcatgcacgaaacacat
ccaggagttcaggatatggcatgtgatactttcttgaaaattgttcagaaatgcaagcgc
aaatttgtgatcacgcaggttggtgagaatgagccgtttgtgtctgaactgttgtctagc
cttgcaaatacagtcggagaccttgaacctcaccagattcatacattctatgagtcggtt
gggcacatgatccaagcagaatctgaagctacaaagagggatgagtatctgaaaaggtta
atggaacttccgaatcagaaatgggcagaaattattggagaagccagccgaagtgttgac
attttgaagcaacaagaggttataagaactgttcttaatatcttgcagacgaacaccagt
gttgccagttcacttgggacatttttctttcctcaaatatcattgatattcttggacatg
cttactgtttacagaatgtacagtgagcttatatctagtagtatagcggaaggggggcct
tatgcttcaaggacttcgttcgtgaaacttctgcggtctgtaaagcgagagactctcaag
ctaatagaaacctttttagacaaggctgaggagcagccccatataggaaagcagtttgtc
ccaccaatgatggatcctgtccttggtgactatgcaagaaatttgcctgatgcgagggag
tcagaagtcttatcgctatttgccacaataataaataaatataaagctgtaatgatggag
gacgtacctcggatattcgaagctgtttttcagtgcactcttgagatgatcaccaagaac
tttgaagattaccccgagcatcgcctcaagttcttttctctattacgagcaattgctacg
cattgttttcaagctttatatcaattatcaagtcagcaattgaagcttgtcatggactct
gtcatctgggcttttcgtcatactgaaaggaatattgcagagactggtcttattcttttg
ttggagatgctcaagaatttccaggcttcaggtttctgtaatcagttccacaggacctac
tttttaacaatcgagcaagagatctttgctgttttgacagacacctttcacaagccaggt
ttcaagctgcatgttttaattctgcagcatctgttttgtctggtcgactctggttcgtta
actgagcccttgtgggatgcttccactgtatctttcccttacccgaataatatggtgttt
gttcgtgattacaccataaaacttctaggatcatcattcccaaatatgactttagcagag
gtgacacaatttgttgatgggatctttacatcaagaagtgatctcccggctttcaagaat
cacattagagattttcttgtacagtccaaagaattttcagctcaggacaataaagatctt
tatgcagaggaggcagcagcccaaaaagaaagggaacgccaaaggatgctgtccattcca
ggccttattgccccgaacgaactgcaggatgagatggttgattcttag
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integrated database retrieval system
