Antiquaquibacter oligotrophicus: LH407_04810
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Entry
LH407_04810 CDS
T09620
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
aog
Antiquaquibacter oligotrophicus
Pathway
aog00190
Oxidative phosphorylation
aog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aog00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LH407_04810
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH407_04810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aog03019
]
LH407_04810
Enzymes [BR:
aog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LH407_04810
Messenger RNA biogenesis [BR:
aog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LH407_04810
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
UDF14185
LinkDB
All DBs
Position
967955..970129
Genome browser
AA seq
724 aa
AA seq
DB search
MNSPDLSDAASATDSLDEYDLDESSSVDDGTLPVDRYLDRELSWLAFNQRVLELAEDDQL
PLLERANFLAIFASNLDEFFMVRVAGLKRRIETGLAVPTNVGTSPIDVLAAVSRKAHELQ
ERHARVFREQVKPALDAADIHIETWSDLGEADRARIDEIFSTQIFPVLMPLAVDPAHPFP
YISGLSLNLSVRVRNPKTGKEEFARLKVPTNLPRFVELPDDASGQMRYIPLEDLISNHLE
ELFPGMEIIAHHEFRVTRNEDVEIEEDPNENLLQALEKQLLNRRFGPPIRLEITDDMDEV
TLGLLVRELDITEQEVYRLPAPLDLGGLFQLTRINRPGLKYPRHIPTTSVSLLPKDNQPP
NIFASIAKQDILLHHPYESFSTSVQAFLEQAAADPNVLAIKQTLYRTSGDSPIVEALIAA
AEAGKAVLALVEIKARFDETANISWARKLEKAGVHVVYGLVGLKTHCKLALVVRQEGGVL
RHYSHIGTGNYNPKTSRIYEDLGLLTASDTVGKDLTRLFNELSGYAIEKKFKRLLVAPLH
LRKGLLKCINAEIENARAGLPSGIRIKVNSIVDEAIIDALYRASQVGVPVELVVRGICGV
IPGREGLSENITVRSILGRYLEHARIFSFHNNGDPQVYIGSSDMMHRNLDRRVEALVRIT
DPSHLRELDEIFDLAMADDTSSWWLDETGTWTRHSRADDGSLLQDMQNVLMTRISSRKRS
ASLR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccccgatctttcggatgccgcatccgccacagattcgctcgacgagtacgac
ctcgacgagtcgtcgagcgtcgacgacggcaccctgccggtcgaccgctacctggaccgg
gagctgagctggctcgccttcaaccagcgggtgctggaactggcggaggacgaccagctg
ccgttgctggagcgcgccaactttttggcgatcttcgcgagcaatctcgacgagttcttt
atggtgcgtgtcgcggggctcaagcgccgcatcgagacgggtcttgccgtgccgaccaac
gtcggcacctcgcccatcgatgtgctcgccgcggtgagccgcaaggcccacgagctgcag
gagcgtcacgcgcgtgtcttccgcgagcaggtgaagcctgcactcgacgcggccgacatc
cacatcgagacgtggtcggatctcggcgaggccgaccgcgctcgcatcgacgagatcttc
tcgacgcagatcttccccgtgctcatgccgctcgcggtggaccccgcgcatccgttcccc
tacatctcggggctttccctcaacctcagcgtgcgtgtgcgtaacccgaagacgggcaag
gaggagttcgcgcgactcaaggtgccgacgaacctgccgcggttcgtggagttgccggat
gatgcgagcggccagatgcgctacatccccctcgaggacctcatctcgaatcaccttgag
gagctcttcccggggatggagatcatcgcccaccacgagttccgtgtaacccgcaacgag
gatgtagagatcgaggaggacccgaacgagaacctcctgcaggcgctcgagaagcagctg
ctgaaccgccgcttcggcccgcccatccgtctggagatcacggatgacatggacgaggtc
actctcggtctgctggttcgcgagctcgacatcaccgagcaggaggtgtaccggcttccc
gcgccgctggacctcggaggtctgttccagctcacccgcatcaaccggccggggctgaag
tacccccgtcacattccgacgacgagtgtgagtttgctgccgaaggacaaccagccgccg
aacattttcgcgtccatcgccaagcaggacatccttctgcatcacccgtacgagtcgttc
tcgacgagtgtgcaggcgttcctggagcaggcggccgccgacccgaatgtgctcgccatc
aagcagacgctgtaccgcacgagcggtgacagccccatcgtggaggcgctcatcgctgcg
gccgaggcgggcaaggcggtgctcgcgctcgtggagatcaaggcgcgtttcgatgagacg
gcgaacatctcgtgggcgcgcaagctggagaaggcgggtgtgcacgttgtgtacggcctg
gtcggtctcaagacgcactgcaagctcgcgctcgtggtgcgtcaggagggcggggtgctc
cgccactacagccacatcggcacgggtaactacaacccgaagacgagccgcatctacgaa
gacctgggtctgctgacggcaagcgacaccgtgggcaaagacctcacgcgtctcttcaac
gagctgtccggctacgcgatcgagaagaagttcaagcgccttctggtggcaccgctgcac
ctgcgcaagggtttgctcaagtgcatcaacgccgagatcgagaacgctcgcgctggcttg
ccgtcgggcatccgcatcaaggtcaactcgattgtcgacgaggcgatcatcgatgccctg
taccgcgcgagccaggtcggggtgccggtggagcttgtggtccgcggcatctgcggtgtc
atcccgggccgtgaggggctgagcgagaacatcacggtgcgttcgatcctcggccgatac
ctcgagcacgcgcgcattttctcgttccacaacaacggtgacccgcaggtgtacatcggt
agttccgacatgatgcaccgcaacctggaccgccgcgtcgaggcgctcgtgcgcatcacc
gatccctcgcacctgcgcgagctcgacgagatcttcgacctcgcgatggcggatgatacg
tcgtcgtggtggctcgatgagacaggaacctggacacgtcattcgcgtgcggacgatggc
tcgttgcttcaggacatgcagaatgtcctcatgacacgaatctcctcccgcaagcgttcg
gcgtcccttcggtga
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