Anastrepha obliqua (West Indian fruit fly): 129240266
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Entry
129240266 CDS
T09777
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129240266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129240266
Enzymes [BR:
aoq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129240266
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129240266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
129240266
NCBI-ProteinID:
XP_054731931
LinkDB
All DBs
Position
1:complement(71173887..71179944)
Genome browser
AA seq
1652 aa
AA seq
DB search
MRKGNALEVDMLPSDLEFGVFSSEEIKRLSVVKIITGLTFDPLGHPLPGGLYDSLMGTYG
RRMEPCATCYNIQECPGHMGHIELNTLVFNPFFIKLVQKILSIFCLNCFKIQLKVHVCEV
LALQLRLLDAGYIAEAQELEIFKSEVVCQNDENLVKLESGEYVHPHIAAMFELLKKGHSN
VSNNTKTSCGIRSAIVHAAFQRVAFKKCIHCKKPLRNIRYLYRKLIYYITAEEMRNSMPE
ARQFTGQNKSIFADECRKFLRQIYLNYPDLLKLLCPILKLNNSGNSCPVDIFFMDTIAVV
PPKARPPNILHDQILEHPQTAIYRSIIENNAVLRVVIKHLKGLREELPEEAQRVYESTKG
ESPYEKLYNAWQTLQTSVDLLLDITASRDSPSSQGLKQVLEKKEGLIRKHMMGKRVNYAA
RTVITPDPNINVEEVGIPDIFARKLSYPVPVTPWNVAELRKMVMNGPDIHPGANYIQDEK
GYTTLIPADNAAKRESMAKLLFNYPENGIKVVHRHVLNGDVLLLNRQPSLHRPSIMAHKA
RILPGEKTFRLHYSNCKAYNADFDGDEMNAHLPQSEVARAEAYNLVNVANNYLVPKDGTP
LGGLIQDHVISGVKLSIRGRFFNREDYQQLVYQGLSDLRDKIKLLRPTILKPTMLWSGKQ
VLSTIIINLTPEGYSRINLHTQAKINSKHWIVSMAHEAACGALGGGELCESNVIIHKGEL
LTGVLDKQQYGATTYGLIHCMYELYGGQVSTRLLTAFTKVFTTFLQREGFTLGVQDILVT
ADADAQRRKIVKECRRTGDSAVAAALDLDEIPSLDVLVGKMEEAYTKDPKFRVILDRKYK
YLLDRYTNDINRTCLPDGLISKFPQNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRP
PLMISGKSLPSFTAFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGLTVGYDMTVRDSDSSVVQYLYGEDGLDILKSKFFNTKFCMQFLALNST
AIIHPNELRSIKDEQTLLRISRHVKKLRKWQNKHNGKLDSPETKRIPSAFANFSANSQAK
GNLDELNSKTGRSMGDEYKQKLWRKADAETKEFYKKLSARCPDPTTSVYKQDNCYGSTSE
RLEKLVEDYMKKYPNSKAAIDDIIYIKNLKALASPGEPVGLLAAQSIGEPSTQMTLNTFH
FAGRGEMNVTLGIPRLREILMLASANIKTPSMDIPIKMNQSKNADKLRIKLNRVTLADIL
QFVKVKTKLVLKPERAHQYILRFQFLPREAYQDDFCVRPKKVLKYMSEIFFKVLFRAVIR
SSKSKKSIIEINEDKVGSNKESHDKDLDEDESRNEVSDHFKKDKSTNGGEVDSSDDENAN
EEDDATGRKFKSRKQDETEYDDPEELEEIKDADDDDEIGVGENEDEEDTGKSDTIDALVE
TVLNNELVQEYTYDKEKHQWCKLTFNLNMKYKKPDISSIIRELASKCVVHEVQNIKRAII
YKGDNDVNLLKTDGINIIEVFKYNDVLDLNRLYSNDIHAIAKTYGIEAAAQVIIKEVTNV
FKVYGITVDRRHLSLIADYMTFNGTFQPLSRKGMEHSSSPLQQMSFESCLQFLKNAAGSG
RIDDLSSPSGRLIVGLPVRNGTGAFELLTKIC
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagggcaacgcgttggaagtcgatatgcttccttcggatctggaatttggcgtg
ttcagcagtgaagaaattaagcgactaagtgtagttaaaattatcactggcctaacattc
gatccactggggcatcctttgcccggcggtttgtacgacagcttaatgggcacttacggc
cgtcgaatggagccgtgtgccacttgctataacatacaggaatgcccaggacatatgggt
catattgagctaaatactttagtatttaatccattcttcataaaacttgtacaaaaaatt
ttgagcattttttgcttaaactgcttcaaaattcaattaaaagttcatgtatgtgaagta
ctcgcattacaattgcgccttttagatgcgggatacatcgccgaagcgcaagaactagaa
atatttaaatcagaggtagtgtgtcaaaatgatgaaaatttggttaaactggaaagtgga
gaatatgtgcacccgcacatagcagctatgtttgaacttttgaaaaaaggacattcaaat
gtatctaataacacgaagacttcctgtggaatacggtcagctatagttcatgccgctttt
caacgtgtagcttttaaaaaatgtattcattgcaagaagccgttgcgtaatattcgctat
ttgtaccgaaaacttatttactacattacagcggaagagatgaggaattcgatgccggaa
gcacgccagttcactggacaaaacaaatcgattttcgctgatgagtgccgcaaatttttg
cgacaaatttatttgaactacccagatttattaaaacttttgtgtcccatattgaagcta
aataatagtggtaatagttgccctgttgatatattttttatggatactatagcagtagta
ccacctaaagcccgtccacccaacattttacatgaccaaattctagagcatccacaaact
gcaatttataggtctataattgaaaacaacgccgtgttgcgtgtagttataaagcatcta
aaagggctacgagaagagctacccgaagaggcgcaacgtgtttatgaaagtactaaaggg
gaatccccatatgagaagctgtacaatgcatggcaaactctacaaacatcagttgattta
ttgttggatataaccgctagtagagattccccatcttctcaaggccttaaacaagtttta
gaaaaaaaggaaggcctaatacgcaagcatatgatgggtaaacgtgtaaactatgcagct
agaactgttataacacccgacccaaatatcaacgtcgaggaagtgggcattccagatatt
tttgcacgcaaattaagttaccccgtaccggtaacaccttggaacgtcgctgaattgcgt
aaaatggttatgaacggtcctgatatccaccctggagccaactatattcaagatgaaaag
ggttatacaacccttatacccgcagataacgctgcaaaacgtgaaagcatggctaaacta
ctttttaattatccggaaaatggaataaaagtggtgcatcgtcatgtgcttaatggtgac
gtactcttgctcaatcgccagccgtcacttcatcgaccatcaatcatggcacataaagca
cgcatactgcctggtgaaaagacttttcgtctacattattcgaactgcaaggcatacaat
gctgatttcgatggtgacgaaatgaatgctcatcttccgcaaagtgaagtagcgagagcg
gaggcgtataatttagtaaacgttgcaaacaattatctggtacctaaagacggtacccct
ctgggaggtttaattcaggatcacgttatttcgggtgtaaaattatccatacgcggacgt
ttctttaaccgagaagactatcaacaacttgtgtaccaaggtctctcggatttaagagac
aaaataaaactccttcgaccaacaattttaaagccgaccatgctttggtcaggaaagcag
gttctttcaacaataatcatcaacttgacaccagaaggatattcaagaataaatttacat
acacaagcaaaaattaattcaaaacactggattgtttcaatggctcatgaagctgcatgc
ggtgctttaggtggcggcgagctgtgtgaaagcaatgttataatccataaaggagagctg
cttactggggtcctagacaaacagcagtatggcgcaacaacttatggtttaattcattgc
atgtatgagttgtatggcggccaagtatcaacgcgtctgttgactgcatttacaaaagta
tttacaacatttttgcaacgagaaggatttacgcttggtgtacaggatattttagtaacg
gctgacgcagacgcacagaggcgtaaaattgtcaaagaatgtcgtagaactggcgactca
gctgttgctgctgctttagatttggacgagataccttcgcttgatgtgcttgttggaaaa
atggaagaagcgtacacaaaagatcccaaatttcgtgttattttagatcgcaaatacaaa
tatttgctggatcgttataccaacgatataaatcgaacttgcctgccagatggtctgatt
tccaaattcccacaaaacaatttacaattaatggtgttatccggcgcaaaaggatctatg
gtaaatactatgcaaatttcatgtttgttgggccaaattgaattggaaggaaaacgtcca
ccgttaatgatatctggcaaatcattaccaagcttcacagcgtttgagacgtcgccaaaa
tcgggtggtttcattgatggccgctttatgaccggcatacagccgcaagattttttcttt
cattgcatggccggacgtgaaggactcattgataccgctgttaaaacttcacgttcaggt
tatttgcaacgctgtcttataaagcatctggaggggcttacagttggttatgatatgacg
gtacgtgatagcgatagcagcgttgtacagtatctgtatggcgaagatggattggatatt
ctgaagtcaaaattcttcaatacaaagttttgtatgcaatttttggcacttaattctaca
gcaattattcacccaaacgaactgagaagtatcaaagatgagcaaacactattgagaatc
tcaagacatgtaaagaagcttcgaaaatggcaaaataagcacaatggaaagctcgattca
cctgaaacaaagaggataccctcagcctttgctaatttttcagcaaactctcaagcaaaa
gggaatttagatgaattaaattccaagacaggacgtagcatgggagatgaatataaacag
aagctttggagaaaagctgacgcagagacaaaagaattttacaaaaaattgagtgcgcgt
tgtcctgatcccacaacatctgtttacaaacaggacaactgttacggtagtacttctgaa
cgactcgaaaaactagtagaagactatatgaaaaaatatccaaacagtaaagctgcgata
gatgacataatatatataaaaaatttgaaagcattggcctcgccaggagaacccgttgga
ttattagccgcacaatctattggtgaaccttccactcagatgacattgaatacttttcac
tttgccggtcgtggtgaaatgaacgtcacactaggtattccccgcttacgcgaaatttta
atgctagcttctgctaacatcaaaacgccgtcaatggatattccaataaagatgaatcag
tcgaaaaatgccgataaattacgtattaagttgaatcgcgtaacccttgcggacatacta
caatttgttaaggtgaaaaccaaactggtgctaaaacctgaacgtgcgcatcaatatatt
ttacgatttcaatttcttccccgggaagcctatcaggacgatttctgtgtacgaccgaaa
aaggtgctgaaatatatgagcgagatatttttcaaggtactgtttcgtgctgttataagg
tcctcaaagagcaagaaatctataattgaaataaatgaagataaagtcggtagcaacaag
gaaagccatgataaagatttagacgaagatgaatctagaaatgaagtcagcgatcacttc
aaaaaagataaatcaacgaatgggggtgaagtggattcatcagatgacgaaaatgcgaac
gaggaggatgacgcaactggtagaaagtttaaatcccgcaaacaagacgaaactgaatat
gatgaccctgaagaattagaagaaattaaagatgctgatgatgatgatgagattggagtg
ggagaaaatgaagatgaagaggatacaggcaaatcggacacgattgacgctcttgtcgag
actgtgttgaacaatgagttggttcaagaatatacttacgacaaagaaaaacatcagtgg
tgcaagctcacctttaatctaaatatgaagtacaagaaaccagatatttcttctataatt
cgagaattggccagtaaatgtgtggtgcatgaagtacagaatataaaacgtgctattata
tataaaggcgacaatgatgttaatttgctcaaaactgacggtattaacattatcgaagta
ttcaaatacaacgatgttttagatttgaatcgcctttattctaatgatatacatgcgatt
gcaaaaacatatggaatcgaagcagcggcgcaggttataattaaagaagtgacaaatgtt
ttcaaggtgtacggaattactgttgatagacgtcatttatcgttaattgctgattatatg
acttttaatggcacttttcaaccactctcacgaaaaggcatggaacattcgtcttcgcca
ttgcaacaaatgtcatttgaatcttgtttacaattcttaaaaaatgcagccggaagcggg
cgtatagatgacctcagctcaccatcaggtcgtttaattgttgggctgcccgtgcgaaat
gggacaggtgcctttgaactgttaactaaaatttgttaa
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integrated database retrieval system
