Anastrepha obliqua (West Indian fruit fly): 129247170
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Entry
129247170 CDS
T09777
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03020
RNA polymerase
aoq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129247170
09124 Replication and repair
03420 Nucleotide excision repair
129247170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129247170
03400 DNA repair and recombination proteins [BR:
aoq03400
]
129247170
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129247170
DNA repair and recombination proteins [BR:
aoq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129247170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
129247170
NCBI-ProteinID:
XP_054742133
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All DBs
Position
5:complement(47590271..47591236)
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AA seq
275 aa
AA seq
DB search
MPYANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDEVVERLQYTRDCICLDFCPECSVEFTLDVKCTEEQTRHVTTADL
KSSNPKVLPVTSRHLNEEDNEYGESTDEILIIKLRRGQELKLRAYAKKGFGKEHAKWNPT
AGVCFEYDPDNAMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAKPNKFFYNVESAGAL
KPENIVIMGVQVLKNKLSNLQTQLSHETQNDALAV
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgcaaatcagccatctgttcaaatcactgaattaaccgacgataatgtaaaa
tttgttctagaagacactgaattaagtgttgctaatagtttgcggcgtgtatttattgcg
gaaaccccgacactggccatagactgggtacagcttgaagctaattccactgtactatct
gatgagtttcttgcacatcgtattggccttattcctttaatatctgatgaagtggtagaa
cggcttcaatacactagagattgtatttgtttggacttttgtcccgagtgtagtgtggaa
ttcacccttgacgttaaatgcacagaagagcagactcgtcatgttacaactgctgacttg
aaatctagtaacccaaaagtattgcctgtaacatcacggcatttgaatgaagaagataat
gaatatggtgaaagtacggatgaaattttaataataaaactacgtcgaggacaggaattg
aagttgagagcttatgcaaaaaaaggctttgggaaagagcatgccaaatggaatccaacg
gcaggtgtttgcttcgaatatgatcctgacaacgctatgcggcatacattatacccaaaa
cccgatgaatggccaaaaagtgagcataccgaattggaagatgatcagtatgaagcacct
tataattgggaagcgaaaccgaataaattcttttataatgtggagtcagctggagctctt
aagcccgaaaatatagtaataatgggagtgcaggttttaaagaataaattgtcaaacctt
caaacgcagttgagccacgaaacgcaaaatgatgcacttgccgtgtaa
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