Anastrepha obliqua (West Indian fruit fly): 129247951
Help
Entry
129247951 CDS
T09777
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129247951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoq03021
]
129247951
Enzymes [BR:
aoq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129247951
Transcription machinery [BR:
aoq03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129247951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
129247951
NCBI-ProteinID:
XP_054743310
LinkDB
All DBs
Position
5:complement(79030239..79034119)
Genome browser
AA seq
1122 aa
AA seq
DB search
MKMYPTLTNSRPDFKKIPDKLNEHLENLGAPHLDSFNEMLTIGLNNCAKYMTPVSFKTPA
GEQIELRVESIQIARPQVPMAVIDVKTRLIYPTESRQSHTSYMGMCTVRVGWTVDGLEKA
PINVDLGEVPIMLKSNACNLGALTPEEMVKHGEHDTEWGGIFVIKGNERIIRMLLMSRRN
YPIAVKRSTWKDRGANFSEIGVMVRTVREDETSFNNVLHFLNNGTAKLMFSQMKRLSYVP
ICLILRCLVDYSDEQIYRNLVRGYEKDQYYVSCVQTMLRDVHGEGLHTHNDCKAYLGKIF
KSRFPEVPEWKTDVDVTDFILNERILIHLNTHKEKFDLLVFMVQKLFQCAQGNYKIENVD
AVMMQEVLLAGHLYQKFLADRVDLWLQYAKKYVMKRLEAPDALITPPLLTTCLRNGGGVS
HAMESFLATGNAPSRSGLGLMQNTGLVVMAENINRIRYMSHFRAVHRGSYFLTMRTTEAR
QLLPDAWGYICPVHTPDGAPCGLLNHLTMSCRISRIPKKELVEAIPKYLIEMGMIPLESE
MYDANAKLFVVLLEGKLLGHIRQVDAEKIVNRLRSLKIEGYLPKMMEIAYIPYKAKGQFP
GLFLFVGPTRLMRPVRNLALGKIEYIGSLEQVYMDIAIDLKEFYPGFTTHMELSKTEFMS
NLANLIPMPDYNQSPRNMYQCQMGKQTMGTPCLNWPKQASNKLYRLQTPTTPLFRPVHHD
NIRLDDFAMGTNAIVAVISYTGYDMEDAMIINKSAHERGFAYGSIYKSKFIELEGNSYFA
RSPHLPELSKILDNDGLPHAGTKLYHGCPLYCYFDMDSSNYKVVKLDEKEDCVVDSVRYC
GSFKANARRLVCVTIRIPRPPTIGDKFASRAGQKGICSQRYPAEDLPFSETGLIPDIVFN
PHGFPSRMTIAMMIETMAGKSAALHGLVHDATPFRFSEKHTAIDYFGRLLEAGGYNYYGT
ERLYSGVDGREMTADIFFGVVHYQRLRHMVFDKWQVRSTGPVDAITQQPIKGRKRGGGVR
FGEMERDALISHGAAFLLQDRLFHNSDKTHTLVCSKCGSILAPMQKIIKRTETGKLQSMP
DTCRLCGDGSAVGHIEIPFSFKYLVTELSSVNINARFKLMTI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtacccaaccttgacaaatagtcggcctgacttcaaaaaaattccagataag
ctgaacgagcatttggaaaatttgggagctccacatttggattctttcaatgaaatgctc
acaattggtttgaacaattgcgcaaaatacatgacgcctgttagctttaaaacgccagct
ggtgaacaaatagagctgcgcgtggaaagtatacaaattgctcgtccacaagttccaatg
gcggtaatagatgtaaagactcgcttgatatatcctactgagtcacgacaatcgcatacc
tcatacatgggtatgtgcacagtgcgggtaggttggacggtggatggtttggagaaggct
ccaataaatgtggatctgggtgaagtgccgattatgctgaaatccaatgcatgcaacctt
ggtgcactaacaccagaagaaatggttaaacatggagaacacgataccgaatggggtgga
atttttgtcataaaaggaaatgaaagaatcatacgtatgttgctgatgagcagacgcaac
tacccgattgcagttaaacgttccacgtggaaagatcgaggagcaaactttagtgaaatt
ggcgtaatggtgcgcacagtacgcgaagatgaaacttcatttaataatgtactacatttt
cttaataatggcactgcaaagttgatgttctctcaaatgaaaagattgtcttatgtgccc
atatgtctcatactgagatgcttggttgattatagcgatgagcagatataccgtaatttg
gtacgtggttatgaaaaggaccagtattatgtttcatgtgtacaaacaatgcttagagat
gtgcatggcgaggggttgcatacccataacgattgcaaggcatatttgggaaagattttt
aaatcgagatttccagaggttcctgagtggaaaaccgatgtggatgttacggacttcatt
ctgaatgaaagaatacttattcacttgaatacacataaagaaaagtttgatttgttggta
tttatggtccaaaaactatttcaatgtgcacagggaaattataaaattgaaaatgttgat
gcagtaatgatgcaagaggttctgcttgcaggccacttatatcaaaaatttttggctgat
cgtgtcgatctgtggctgcagtatgctaaaaaatatgttatgaaacgtctagaggcaccg
gacgcattaataacaccacctttacttacaacttgtttacgtaatggaggcggcgtctcg
cacgccatggaatcttttcttgccacgggcaacgcaccttcgcgttctggtttggggctt
atgcagaacactggccttgtcgtgatggctgaaaatatcaatcgcattcgttatatgtct
cactttcgtgcagtacatcgtggctcatactttctcactatgcgtacaacagaagcacgt
caattgctgcccgatgcttggggctacatttgtcctgtccatacacctgatggtgcgcct
tgtggtctgcttaatcacttgactatgtcgtgtcgcatatcgcgcattccgaagaaggag
ctagttgaggctataccgaagtatttgatagaaatgggtatgataccattagagtcggaa
atgtatgatgcgaatgcaaaattatttgttgtattgttggaaggcaaactattgggccac
atacgtcaagtagacgcagagaaaatagtaaataggttacgttctttaaaaattgaagga
tatttacccaaaatgatggaaatcgcatatataccttataaagcgaaaggtcaatttcca
ggattgtttctctttgttggacccacgcgccttatgcgtccagtacgaaacttggcgctt
ggaaaaatcgaatacattggttctctagaacaagtatacatggatattgcaatcgatttg
aaggaattctatcccggttttaccacacatatggaattgtcgaaaacggagtttatgagc
aatttggcgaatttaattcctatgccagactacaatcaatcaccaagaaacatgtaccag
tgtcagatgggtaaacaaactatgggtacgccatgccttaactggcctaagcaagctagt
aataaattataccgcttacaaacccccacaacaccgctctttcgaccagtacaccatgat
aatataaggcttgatgactttgcgatgggaactaacgctattgtcgctgtgatatcatac
acaggctacgacatggaggatgccatgattataaacaagtctgcccatgagcgcggtttt
gcttatggcagcatatacaaatcaaaatttatcgaactagagggtaatagttactttgcg
cgcagcccacatttgcctgaacttagcaaaatattggacaatgacggtttgccacacgct
ggcacaaaactgtaccacggctgtcctctctattgctactttgatatggactcatcgaat
tataaagttgtaaaactagatgaaaaagaagattgtgttgtggatagtgtacgctattgt
ggtagctttaaggcgaacgcacgtcgtttggtatgtgtgacgatacgaataccccgccct
ccgacaattggtgacaaatttgcatcccgtgctggccagaaaggcatctgctcacaacgt
tatccggccgaggatttgcccttcagtgaaacggggctcataccagatattgttttcaac
ccacacggtttcccatcacgtatgacaatcgctatgatgattgaaacaatggcaggcaaa
agtgctgccttgcacggactcgtgcacgatgcaacaccgttccgcttttcagagaaacat
acggcaatcgattactttggccgcttactggaagcgggtggttacaattactatggcacg
gaacgtctttactcgggcgtggatggtcgtgaaatgacagcagacattttctttggcgta
gtacattatcagcgactacgtcacatggttttcgataagtggcaagtgcgatcaacgggt
ccagtcgatgccataacacagcaacccataaagggtcgcaagcgtggcggtggtgtacgt
ttcggagagatggagcgtgatgctttgatttcacatggagccgcctttcttctgcaagat
cgtcttttccacaactctgacaagacgcatacattagtgtgcagcaagtgtggtagtata
ttggcaccaatgcagaagatcatcaaacgcacagagactggtaaattgcaatcgatgcca
gacacttgtcgtctgtgtggtgatggttctgctgtaggtcacattgaaattccgttctcg
tttaaatatttggtaaccgagctgagctcagtaaacattaatgcgagatttaagttaatg
actatctaa
DBGET
integrated database retrieval system
