Andrographis paniculata: 127258846
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Entry
127258846 CDS
T08689
Name
(RefSeq) DNA mismatch repair protein MSH6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
apan
Andrographis paniculata
Pathway
apan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127258846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apan03400
]
127258846
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127258846
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
YL1
Motif
Other DBs
NCBI-GeneID:
127258846
NCBI-ProteinID:
XP_051141835
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MASSKKTSNGRSPLVNPQRQITAFFSKKPESASSASPSPSPVLSKKNPNPNPDGMTSPIT
PSPLQSKSKPVLLISPKLASASASTSPGSLISGKKQYGAEVVDRRIRVYWPLDKTWYEGC
VKSFHKTSGKHTVQYDDAEEETINLLEEKIEWIEEPAKKKLRRLRKISVVEDEEDEEEDH
KELEDDSDDEDWGSKVEKEMVEDEDGLEDSDLELEEETERTGARKHVISRKRKVGKGEQI
GSSCTKKHKKSGELKYKSDTSTDSIPSKEKQVEPSKRINPESGKVSALDSNISVDAAERF
VTRDAQKLRFVEIDRMDARRRRPGDADYDPRTLFLPPNFVKGLTGGQKQWWEFKSQHMDK
VLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSINVEKLAIKGYRVLVV
EQTETPEQLELRRKEEGSKDKVVKREICAVITKGTLTEGEILSTNPDASYLMALAESCEN
LTNQPESHIFGICLVDVATSKIVLAQFRDDADCSSLCCLLSELRPVEIVKPAKLLSPEAE
KALFRHTRNPLINELIPFSEFWNAEKTVQEVKNIYQRIGDHSCYSTINETTLHPSGSSSE
NGNRNCLPDVLSNLASDGENGSQALSALGGALFYLRQSFLDETLLRFAKFELLPCCDLRK
LTHKPYMVLDAAALENLEIFENSRNGDSTGTLYDQLNHCITAFGRRLLRTWLARPLYHFK
SIKERQDAVAELKGVNQPYVLGFRKEISKIPDMERLLARIFTSSEASGRNASKVVLYEDA
AKKQLLEFISALRGCETLANASSSFCSALGNVESSLLHHLLTPGAGIPNISSTLRYFKDA
FDWEEAYESGRVIPREGADVEYDAACQRVKDIESNLQKHLKEQRKLLGNASIRYVTIGKD
AYLLEVPESLSHSIPKEYELKSSKKGFFRYWTPVIKKLMGELSLAESEKEQKLKSILQRL
IGRFCENHCEWRQMVSTIAELDVLISLSIASDYYEGKTCRPIISPPHSDNLPCLSAKGLG
HPMLRSDTLGKGSFVTNDVTLGGSGNASFILLTGPNMGGKSTLLRQICLATILAQIGADV
PAESFELVPVDRIFVRMGAKDQIMSGHSTFLTELLETASMMNSATPNSLVALDELGRGTS
TSDGQAIAASVLEHFICTVQCRGMFSTHYHRLAVDYENNTKVSLCHMACHVAKGVRGLEE
VIFLYKLTPGACPKSYGVNVARLAGLPDTVLQRAVAKSQEFEGSHCKRLNLSSNELEDEA
SLIIKNAIKIVAAAEPSNEHSVTCLANLQSNARLLLQPQQN
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatcgaagaaaacgagcaatggacggtccccactggtgaatccgcagcgtcag
atcactgcgttcttcagcaagaagccggagtccgcatcgtctgcttccccctcgccatcg
cccgtgctttccaaaaaaaaccctaaccctaaccctgatggaatgacgagtccgattacc
ccttcgcctctccaatcaaagagcaaacctgtgctgctcatctccccaaaattggcttct
gcttctgcttctacttctcctggaagccttatctctggtaagaaacagtacggcgcggag
gttgttgataggaggatcagagtgtattggccgttggataagacttggtatgaaggttgt
gtgaagtcgtttcataagacatcgggaaagcataccgtgcagtatgatgatgctgaggag
gaaacgattaaccttttagaggaaaagattgagtggattgaagagccggcaaaaaagaag
cttcggaggttaaggaaaatatcggtggtggaagatgaagaagatgaagaggaggaccac
aaagaactagaggatgactctgatgatgaagattggggatcgaaggtggagaaggaaatg
gtagaagatgaggatggattggaggattcagatttggagttagaagaggaaactgaaaga
actggtgctcggaaacacgttatatccagaaaacggaaggtgggtaaaggagaacaaata
ggatcttcttgtacaaagaaacacaagaaatctggagagttaaagtataagagtgatacg
tcaacagattctattccttctaaggaaaagcaggtcgaaccttctaaaagaattaaccct
gagagtgggaaggtatctgctttagatagcaacatctcagtagatgctgcagaaagattt
gtcacacgagatgcacaaaagttgcgctttgttgagatagatcgtatggatgcccgcaga
aggcgccctggggatgcagactatgaccctagaacacttttcttgcctcccaacttcgta
aaaggcttaactggtgggcagaagcaatggtgggagtttaaatcacagcatatggacaag
gttctctttttcaagatgggcaagttttatgagctttttgagatggatgcacatgttggt
gctaaagaacttggtttacaatatatgaagggggagcaacctcactgtggatttccagaa
aagaacttctcaataaatgtagagaagctggcaataaagggttatcgggttcttgttgta
gagcaaacagagacacctgaacaacttgagcttcgtcgaaaagaagagggttcaaaagat
aaggttgtgaaacgtgagatctgtgctgtgatcacgaaaggaactttaacggagggggag
atactatcaaccaaccctgatgcatcttatctaatggcattggccgagagctgtgaaaat
ttaacaaaccaaccagaatctcacatttttggtatttgtttggttgatgttgcaacaagc
aaaattgtccttgcgcagtttagggatgatgcagattgcagttcattatgctgtttgtta
tctgagttgaggccagtggaaattgtaaaacctgctaagctgttgtctcctgaggctgaa
aaggcattgtttagacacaccagaaatcctctgattaatgagttaatccctttctctgaa
ttctggaatgccgagaaaactgtacaagaagtcaagaacatctatcagcgtattggtgac
cattcatgttattcaactataaatgaaacaactttgcatcctagtggttcttcctcggaa
aatggcaatagaaactgcctacctgatgtactatctaatcttgctagtgatggtgaaaat
ggaagccaagctctctctgctcttggaggcgctcttttctatctgaggcagtcttttctg
gatgaaaccctccttagatttgcaaagtttgagttgcttccatgttgtgacttaaggaaa
ctcacacataaaccatatatggttctcgatgcagctgcactggaaaatcttgaaatattt
gaaaacagcagaaatggagattcaacagggacattatacgatcaactgaatcattgtatc
acagcatttggtagaagattgcttagaacatggcttgcaaggcctctgtatcatttcaag
tcaattaaagaaaggcaggatgctgtagccgaattaaagggggttaatcaaccatatgtg
cttggatttagaaaagaaatttccaagattccggacatggaacgcttgcttgcacgcatt
ttcactagcagtgaagccagtggaaggaatgctagtaaggttgttctatacgaggatgca
gcaaagaaacaactactagagttcatttcagctctgcgtggctgtgaaacgttggccaat
gccagttcttccttttgttctgctttagggaatgtggagtctagtctattgcaccattta
ttaacgcctggtgcagggattcctaatatcagttcaactttgaggtatttcaaggatgcc
tttgattgggaggaagcatatgaatcagggcgtgtaatacctcgagaaggagctgatgtt
gagtatgatgctgcatgtcaaagagttaaagacattgaatccaaccttcaaaagcatctg
aaggaacagcgcaaattactcggaaatgcatcaatccgttatgtaacaattggaaaagat
gcataccttttggaagtgcctgagagtttatcacatagcattccaaaggaatacgaatta
aaatcatccaagaagggtttctttcggtactggacacctgtgattaaaaaattaatgggt
gagctttccctcgctgaatctgagaaagaacagaaattgaagagcattcttcagaggcta
attggacgattttgtgagaatcactgtgaatggagacagatggtttctaccatagcagaa
ctggatgttttaatcagcctgtcaattgcaagtgactattacgaaggaaaaacatgccgt
ccaattatatctccaccacattctgataacctgccatgcctgagcgctaaaggtttgggg
catcctatgctgaggagtgatactttagggaagggctcctttgttacgaatgatgtcaca
ttgggtggttctggtaatgccagcttcatattgctcactgggcctaacatgggtgggaag
tctactcttctccgacaaatttgcttggctactattttggcacagataggagcagatgtg
cctgccgaaagctttgagctggttcctgttgaccggatatttgttcgaatgggtgccaaa
gatcaaattatgtctggacatagcacttttcttacagagcttctggaaactgcatctatg
atgaattcggctactccgaattcactcgtggcattggatgagctaggaagagggacatca
acatcagatgggcaagccattgctgcgtcagttcttgagcattttatctgcacagttcaa
tgtcggggaatgttttctacacattatcataggttggctgtcgactatgagaacaatacg
aaggtctctctctgtcatatggcatgtcacgttgcaaaaggagtgagaggtctggaggag
gtcatattcctttacaaattgacacccggtgcatgccctaaaagttatggcgtgaatgtt
gctcgattggccggacttccagacaccgtattacaaagagctgttgcaaagtcacaggaa
tttgagggcagtcattgcaagagactcaacttgtcctcaaacgagttggaagacgaggca
tctttgatcatcaagaacgccataaagattgttgctgccgcagaacctagtaatgaacac
tcggttacttgtttggccaacctgcaaagtaatgcaagactactactccaaccccaacaa
aattag
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