Candidatus Puniceispirillum marinum: SAR116_1056
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Entry
SAR116_1056 CDS
T01207
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00260
Glycine, serine and threonine metabolism
apb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAR116_1056
Enzymes [BR:
apb01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
SAR116_1056
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
SAR116_1056
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
HI0933_like
FAD_binding_2
Pyr_redox_3
DAO
GIDA
FAD_binding_3
Thi4
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
ADE39299
UniProt:
D5BSQ2
LinkDB
All DBs
Position
1127041..1130082
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AA seq
1013 aa
AA seq
DB search
MAFGKSKSPAAQTSRNATMGRVNRAKPISFTFDGRLYQGYEGDTLASALLANNVHLVGRS
FKYHRPRGILSAGSEEPNALIRLGKGAYAEPNLRATQIELFDGLYAESQNRFPSLDVDVG
AVNSLLARFFPAGFYYKTFMWPASLWMTYEHVIRNAAGLGKVADDHNDPDRYEKTNAHCD
VLIAGGGASGLMAALQAGRSGARVILADEQNEFGGWLLSENDVEIDGDPASTWIAKTVAT
LTTMPEVTLLPRTTVFGYMDSNYLTLNERVTDHLEERPAHLPRQRLWKVRAKQVVLAQGA
HERPLVFSGNDLPGVMMAGAVRSYINRYGVVPGNRTAVFTNNDDAYRTALALHEAGAYVT
VVDLRPEPRGALITAVKRAGIDVLTGHAVTIAHGGKRIARIEVAPVNKDATKVVGDQDYF
DVDLLAMSGGLSPAVHLHSQARGKLQWDDTKLCFKPSSVHEACFNAGACNGNFDLVTAMK
DGMRNGTKAALAAGFKCKDADMPDVATFKQSWRPLAAWKITNGSDAGKGPKAFVDFQNDV
TATDIGIAAREGYQSVEHLKRYTTMGMGTDQGKTSNINALAILADALESEIPEVGTTTFR
MPYTPTNIGAIAGRDIGALFDPVRLTRMDDWHRNAGARFEHVGQWMRAWYYPKDGESMSD
AVNREVRAARVSAGLLDASTLGKIDIQGKDAAEFLNRIYTNSWSKLAVGKCRYGLMLKDD
GMVMDDGVTTRLGENHFHMTTTTGGAAGVLDWMEEWLQTEWPELDVYLTSVTEQWAVATL
SGPKAAKILKDAQIDIDLSASNFPFMSMQDCHIGGIPARIFRISFTGELSFEINVHARHG
LALWTHLMKAGKAHDITPYGTEAMHVLRAEKGFIIVGQETDGSVTPTDLNMDWIVSKQKP
DFIGKRALARQSMALENRKQLVGLQTKDPKRVIVEGAHVVVDPDQPMPMEMLGQVTSSYY
SPNVNRSIAMAMLKGGHKMMGQTVYLPMLDGDVIEAEITDTVFFDPKGERIDG
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttggaaaatcaaagtcccctgcggcgcaaacaagccgtaacgccactatgggg
cgtgtcaaccgcgccaaacccatcagctttacctttgatggcaggctttatcagggttat
gaaggcgatacgcttgcttcggccttgctagcaaataatgtgcatcttgttgggcgttcg
ttcaaatatcaccgtccacgtggcattctgtctgccggatcggaagagccgaacgcgctg
atccgccttggcaaaggtgcctatgccgaaccaaatctgcgcgcgacgcagatcgaatta
ttcgatgggctttacgccgaaagccagaatcgctttccatctctggatgttgatgtgggc
gcggtgaattcgcttcttgcccggttttttccagctggcttttactataagacctttatg
tggcctgcttcattatggatgacctatgagcatgtgatccgcaatgccgctggccttggc
aaggttgccgatgaccataatgaccctgatcgctatgaaaaaaccaacgcccattgcgat
gtgctgatcgctggtggtggcgccagcggcctgatggcagcgctgcaagctggacgcagc
ggcgcccgtgttattctggccgatgaacagaatgaatttggtggttggttgcttagcgag
aatgatgttgagattgatggcgacccagccagcacatggattgccaagacagtggccaca
ttaaccactatgcccgaagtgactttgcttccgcggacaacggtttttggctatatggac
agcaactatctgacgctgaatgaacgtgtgaccgatcatctggaagaacgaccagcgcat
ttgccgcgccagcgcctgtggaaagttcgtgccaagcaggtggttctggcacaaggtgcg
catgagcgtccattggtctttagcggtaatgatctgccaggcgtgatgatggcgggtgcc
gtgcgtagctatatcaaccgttacggtgttgtgccagggaaccgcacagctgtctttacc
aacaatgacgatgcctataggaccgcgctggcactgcatgaagcaggtgcctatgtgacc
gtggtcgatctgcggcctgagccacgtggtgccttgataacagccgtaaaacgtgctggc
attgatgtgctgacaggacatgccgtgacaatcgcacatggcggcaagcggatcgcccgc
attgaagtcgcaccggtcaataaagatgccaccaaagtggttggcgatcaggactatttt
gatgtcgatctgctggcgatgtctggggggttgtcgccggctgtgcatctgcattcgcag
gcgcgcggcaaattacagtgggatgatacaaaactgtgtttcaagccatcaagcgtacat
gaagcctgtttcaatgccggtgcctgtaatggcaattttgatctggtcacggcgatgaaa
gacggtatgcgtaacggcaccaaggcggcacttgctgccggtttcaaatgtaaagacgcc
gacatgccggatgttgcaacattcaaacaaagctggcggcctctggccgcatggaaaatc
accaatggcagtgatgccggaaaaggccctaaagcctttgttgattttcagaatgatgtc
accgcgaccgatatcggtattgccgcgcgcgaaggctatcagtcagtcgagcatctgaag
cgttacaccacaatgggtatgggcactgatcagggcaaaacatcaaatatcaatgcgctg
gccattctggccgatgcgttggaaagtgaaattcccgaagttggcaccacaacattcaga
atgccctatacgccaacgaatatcggtgccattgccggccgcgatatcggcgcgctgttt
gacccggtcagattgacccgcatggatgattggcaccgcaacgccggtgccagattcgag
catgtcgggcaatggatgcgcgcctggtattatccgaaagatggtgagagcatgtctgac
gcggtcaaccgcgaagtgcgtgccgcccgggtgagtgcgggcctactagacgcatcgacg
cttggcaagattgatatccagggcaaggatgctgccgaatttctgaaccgtatttatacc
aatagctggtcaaagctggcggttggcaaatgccgctatgggctaatgctcaaggatgat
ggcatggtcatggatgatggcgtgaccacgcgacttggcgagaaccattttcatatgacc
acaacaaccggcggtgcagctggtgttctggactggatggaagaatggttgcagaccgaa
tggccggaactggatgtgtatctgacctcggtcaccgagcaatgggccgtggcaacatta
tcaggcccaaaggcagctaaaattctcaaagatgcgcagatcgatattgacctttcggca
agcaatttcccgtttatgtcgatgcaggattgtcatattggcggcattccggcgcggatt
ttccgtatttcctttaccggtgaattatcgtttgaaatcaatgttcatgcccgccatggt
ctggcactgtggacgcatctgatgaaggctggcaaagcgcatgatataaccccctatggc
accgaagcgatgcatgtgctgcgcgccgaaaagggctttatcattgtcggacaggaaact
gacgggtcggtgacaccaaccgatctgaatatggactggatcgtttccaaacagaaaccc
gacttcatcggcaaacgcgcattggcgcggcaatcaatggcgctggaaaaccgcaaacag
cttgtcgggctgcaaacaaaggatccaaaacgggtgatcgttgagggtgcgcatgtcgtg
gtcgatcctgatcaacctatgcctatggaaatgctgggtcaggttacttcgtcctattat
tcgccaaatgtaaaccggtcgatcgccatggcgatgctgaaaggcggtcataagatgatg
ggacagacggtctatctgcctatgctggacggagacgttatcgaggccgaaataaccgat
accgtgttttttgatccgaaaggagaacgcatcgatggctaa
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