Anas platyrhynchos (mallard): 101794189
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Entry
101794189 CDS
T02816
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apla03016
]
101794189 (TRDMT1)
Enzymes [BR:
apla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
101794189 (TRDMT1)
Transfer RNA biogenesis [BR:
apla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101794189 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
101794189
NCBI-ProteinID:
XP_027306490
EnsemblRapid:
ENSAPLG00030025613
LinkDB
All DBs
Position
2:complement(142922424..142963930)
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AA seq
404 aa
AA seq
DB search
MAALRVLELYSGIGGMHQALRESCTSAEVVAAVDVNTLANEVYKHNFPSTPLWSKTIEGI
TLKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKLPKYILLEN
VKGFESSSARNELLRTLETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLQQEPFFFHAPG
QILTRFPDLEDKIQDLEELCKDKIVDKVCESSSLPSGEKSLDPNVGPHCSSKKSLPKEAF
LFKLETAEEIARKHNQDNDSSIQMLKDFLEEENEEMSRYFLAPKFLVRYAFLLDIVKPTC
RRSTCFTKGYGHYVEGTGSVLQTAVDVQLESVFKHIENLPEEEKLGKLSTLKLRYFTPRE
IANLHGFPPEFGFPDKVTVKQCYRLLGNSLNVHVVAKLISVLLG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcgggtgctggagctgtacagcggcatcgggggcatgcaccaggccctg
agagaaagctgcacatctgcagaagttgttgctgctgttgatgtgaacactcttgccaac
gaagtttataagcacaactttcccagcacaccactatggtcaaagacgattgagggcata
acactgaaagaatttgacagattatcttttgatatgattttgatgagccctccttgtcag
ccatttacaagaattggcctacaaggtgatgtatctgatccgcggacaaagagctttctc
tatattcttgatattctcccaaggcttcagaagcttccaaaatacatacttttagaaaat
gttaaaggatttgaatcctcttctgcgagaaatgaacttttgcgaacactagaaacatgt
ggatttaagtatcaagaatttctcttgtctccaacctgtcttggcattcccaattctagg
ctgcggtattttctaattgcaaagcttcagcaagagccatttttctttcatgctcctggt
cagatactgacaagattcccagatctagaagacaagattcaggatctagaggaattatgt
aaggacaaaattgttgataaagtgtgtgaatctagttctttgccttctggagagaagagt
ctggatccaaatgttggtcctcactgcagcagcaagaagagtttaccaaaagaggccttt
ctttttaagcttgaaacagcagaagaaattgcaaggaaacataatcaggacaatgattcc
tctattcaaatgctaaaagatttcctggaagaggaaaatgaagaaatgagtcggtatttc
ttagcacccaaattcttggtgcgctatgctttcttgttagacattgttaaacccacttgc
cggagatccacctgctttacaaaagggtatggacactatgtagaagggacaggctcagtt
ctgcagacagcagtggatgtacagcttgaatcagtgtttaaacacattgagaatttacca
gaagaagagaagcttgggaaactgtcaacactaaaactgaggtattttactccgagagaa
atagcaaatctacatggattccctccagaatttgggtttcctgacaaagtaacagtgaaa
caatgctaccgtctcctgggaaatagcctcaacgtacatgtggtggcaaaattgatctcc
gttctgcttggataa
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