Anas platyrhynchos (mallard): 119716375
Help
Entry
119716375 CDS
T02816
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119716375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
119716375
Enzymes [BR:
apla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119716375
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119716375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
119716375
NCBI-ProteinID:
XP_038032334
EnsemblRapid:
ENSAPLG00030026842
LinkDB
All DBs
Position
3:complement(13456906..13472988)
Genome browser
AA seq
1130 aa
AA seq
DB search
MEGGRGPGGGGGGGQQRLMRRRPRLRSGVQRDLPAAHIDSFNYAISEGVYQALQDIAPLE
FALRDSRVSLAIAGAAISPPMVPKGAVCREVKVFPAECRGLRSTYRGKITVDISWSVNGV
PQGTIKHPVGYIPIMVKSKLCSLYNLSPQELIQRHEEEEEMGGYFIINGLEKVIRMLIMP
RRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKEEHAAINMNLHYLENGCVMLNFIFQKELF
FLPLGFALKALVNFTDYQIFKELVKDKENDTFYVNCVTEMLRAVADAGCYTQQNVLEYLG
KSFRVKLNLPEWYSNEQAADLIFNKCVCIHLTDRTEKFYLLCMMTRKLYAFAKGECMEDN
PDSLMNQEVLTPGQLYLMFLKERLENWLQSVRFVLEKRTEKADININADSLIKAFSMTAD
VTKAFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAFAQMRTTT
VRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVSVRDLPPLLCALGVVPIDAT
PSRPYAECYRVVLDGAVVGWVEWDLAPQLAEALRRFKITQEKRFPARAEVVLIPMTGKPS
LYPGFFIFTTPCRMVRPVKNLLYGRKEWIGTLEQIFMNVATMESEVVPGVTTHLELFPHS
ILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYRDRSDNKLYLLHTPQSPLVRPR
MYDFYSMDSYPVGTNAIVAVISYSGYDMEDAMIVNKSSWERGFAYGSVIKMESIDLSLKA
NRGDDNLVFGARPGDPNVAEKLDADGLPFIGSILQPGDPFYSYMNLNTGETFTVYYKNKE
VGIVDNIKLCSNDRGTGKLKKVCITLRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFT
ENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVCYDATPFTFSEEDSALKYFGET
LVSAGYNFFGTEKMYSGISGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQP
IKGRNVEGGIRFGEMERDALLAHGTSFLLHDRLFSCSDGSEAYVCTSCGSMLSPLLQRPP
PSSVASNRRYSCLLCGRVDTIQVIPVPHVFRYFVAELAAMNIKLRLTLEP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggccgggggccgggtggtggtggcggcggcggccagcagcgcctcatgagg
cggcggccgcggctccgcagcggggtgcagcgcgacctgcccgccgcacacatcgactcc
ttcaactacgccatcagcgagggggtgtaccaagcgctgcaggacatcgccccgctggag
ttcgccctgagggacagccgcgtgtcgctggccatcgccggcgccgccatctcgccgccc
atggtgccgaagggggcggtgtgccgggaggtgaaggtgttccccgccgagtgccggggg
ctgcgcagcacctaccgcggcaagatcacggttgacatcagctggtcagtgaatggcgtt
ccacaagggactattaaacatcctgtggggtatattccaattatggtgaagtctaaattg
tgcagcctctataatctctctccccaagagctcatccagcgccatgaggaggaagaggaa
atgggaggctacttcataattaatggcttagaaaaagttattagaatgctgattatgccc
agacgaaatttccctcttgcaatgacaagacacaagtggaaaaacagaggccctggcttc
acagagtatggagtagtgatgcactgtgttaaggaggagcatgctgcaataaatatgaac
cttcactacttggaaaacggttgcgtcatgttgaacttcatttttcagaaagagttgttc
ttccttcccttgggatttgctcttaaggcattagttaatttcacggactaccagattttt
aaagagctggtcaaagataaggaaaacgacaccttttatgtgaactgtgttactgagatg
ctgagagcagtagcggatgcaggctgttacacacagcaaaacgtcctcgaataccttgga
aagagcttcagagtaaaactgaacctcccagagtggtacagcaacgaacaggctgcagat
ctcattttcaacaaatgtgtctgcatacacttaacagacagaactgagaagttctacctg
ctctgtatgatgacccgaaagctgtatgcttttgccaaaggagagtgcatggaggataat
cctgacagtctgatgaatcaggaagtgcttactccagggcagctttaccttatgttctta
aaggagaggcttgagaactggctacagtctgttagatttgttttggagaagagaacagaa
aaggcagatatcaacataaatgcagacagcttgatcaaggcattcagcatgacagcagat
gttaccaaggcatttgagtatcttcttgcaactggcaacctgcgatctaaaactggcctg
ggcatgttacaggacagcggtctgtgtgtggtgggagacaagctgaattttgttcgctac
ctttcccacttccgctgcatacacagaggctcggcgtttgcccagatgagaaccacaact
gtgcgcaagctgctgcccgaatcctgggggttcctgtgccctgtggacacccctgatgga
gagccctgcggtctgatgaaccacatgacagctctgtgtgaaatagtgacagagatggtg
tctgtgagagaccttccacctttgttatgtgccctaggtgttgttcccattgatgcaact
ccaagcaggccttatgctgagtgttacagagtggtgctggacggcgccgtggtgggctgg
gtggagtgggacctggctcctcagcttgcagaagccctccggcgtttcaagataactcaa
gagaaaagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaacccagt
ctgtatcctgggttcttcatttttacaaccccttgccggatggtgcggcctgtcaaaaac
ctgctgtatggaaggaaagaatggattggcactctggaacagatcttcatgaacgtggcc
accatggagtcggaggtggttcctggagtgaccactcacctggagctcttccctcacagc
attctgagtgtggtggccaacctcatccccttctctgatcacaaccaaagtccacgaaac
atgtaccagtgccagatgggaaagcaaaccatggggtttccagtttataactacagggac
cgctcggataacaagctgtacctcctccatactccccagagccctctggtgaggcccaga
atgtacgacttctacagcatggacagctacccggtcggtaccaacgccattgtggctgtc
atctcctacagtggctatgacatggaagatgcaatgattgtgaacaaatcttcctgggag
agagggtttgcttacggaagtgttatcaagatggagagcattgacctttcccttaaagcc
aacaggggagatgataatttagtatttggtgccaggcctggtgacccgaatgttgcagag
aagttagatgctgatggactgccttttattggctccatcctacagccaggggatcccttc
tacagctacatgaacctcaacacaggggagaccttcactgtgtactataagaataaggag
gtgggcattgtagacaacatcaagttatgcagcaacgaccgcggcaccgggaaattgaag
aaggtttgcatcaccttgagagttccccgaaatccaactgtgggcgacaaattcgccagc
cgtcacgggcagaaaggcatcctgagccagctgtggccggttgaagacatgccgttcacg
gagaacgggatggtcccagacatcctcttcaacccccacgggttcccctcccgtatgacc
atcgggatgctgatcgagagcatggcggggaagtcggcagcgctgcacggcgtctgctac
gacgccactcccttcaccttctcggaggaggactccgctctgaaatacttcggcgagacg
ctggtgagcgcgggttacaacttcttcgggacggagaagatgtacagcgggatcagcggc
ctggagctggaggcagatattttcgtgggagtcgtgtactaccagcgcctgcgccacatg
gtctcggacaagttccaggtgaggacgacgggccctcgggactccgtcaccaaccagccc
atcaaggggaggaacgtggaaggtgggattcgcttcggcgagatggagcgcgacgcgctg
ctggcccacggcacctccttcttgctgcacgaccgcctcttcagctgctctgatggctcc
gaagcttacgtctgcacgagctgcggcagcatgctctctcctctgctgcagcggccaccg
ccgtcctccgtggcgagcaacaggaggtattcctgcttgctgtgcggccgggtggacacc
atccaggtcatcccggtgccccacgtcttccgttacttcgtggcagagctggcagccatg
aacatcaagctgaggctgacgctggagccgtga
DBGET
integrated database retrieval system
