Agrilus planipennis (emerald ash borer): 108735303
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Entry
108735303 CDS
T07419
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108735303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apln03400
]
108735303
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108735303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
108735303
NCBI-ProteinID:
XP_018322719
UniProt:
A0A1W4WFL5
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MSKRNSIGNQRNTLFNYFQSPKNKSQQKEESPKPIQSTSNLKEEEKENNDSIDNSPLLVK
KKRNRVVNDSDTEGDGSPKRSIEKPVKKLKLDQSEEDDEGSGVDDEDDSSKRLKKFKFQK
SEDNAEGRNVSSISSQKPSKVSTCVDVGKSFEKNGSWLHNRLEFLKPEKIRDAKKRRPDH
PDYDPKTLHVPEEFLNSQTPAHRQWWIMKGSHFDCVLFFKVGKFYELYHMDAVVGVNYLG
FSYMKNEFAHSGFPESAYGRMASTLVENGFKVARIEQTETPEMMAQRCKSIKPTKFDKVV
SREICQISTRGTCVYGPQNTDARQAMPCYMIAIVMRDLPNCQKRFGISFVDTSIGVFHIS
EFDDDKHCSRFLALLAQHPPGLILTERGNLNLKDLELLKRTIGNVRHDILTPESQFYSAQ
TTIKNLSCGPYFLNNSGELEWPSAFNELISDGTSKLEYELGLKALGACMWYLKDSQLDIQ
VLSLKKFQIYRPVDLNNDKNIQRDFMVIDAVTIENLKLLGGQCSLQKVIDHCETAFGKRL
MQQWICRPLCNVEKIIERQKAVSELVHKGEMLQSARAILKRLPDLERQLAKIHTFGNKYY
AENHPDSRAIFYESQTYTKRRILDLVDTINGFDKARAISEIFKDCESRFLRKLTQHPPKG
MFIDLSEAIQFFVNAVDLEEAKKEGKIIPQSGVDKDFDNVNDEISNLNKQLKKYLKKQED
FFGCSIHYFGTDKKRFQLEIPESRSHKVTSEYMFEGARKGKNAVKRYSTLVTKKFLADML
KLEAERSKIIQDLNRRIFEKFSCRQESWEQIIHCLTTLDAICSLAEFARSYSEETCVPNV
LPFSEKPYIKIKNGRHPCINNVENFVPNDIELGTKDHPCVLLLTGPNMGGKSTLMRQTAV
IMILAQMGSFVPASSCEMTVVDRIFTRLGAQDNILQGQSTFFVELSEASAILQHATVNSF
ALIDELGRGTSTHDGAAVATAYVRKLVDINCRTVFSTHYHTLVDHYSTRFDVQLGHMACM
VENEGDVIEETVTFLYKMMKGQCPKSYGFNVAKLAGLPQSILIRAHAVALDFENTTKQRL
LCSKIVGSDANSIRSVLLQVK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggaatagcatcggtaatcagcgcaatacactttttaattactttcagtca
cctaaaaacaagtcccaacagaaagaagaaagtccaaaacctattcaatccacttctaac
cttaaagaggaagaaaaagagaataatgattcaattgataacagtccactactagttaaa
aaaaagaggaatcgtgttgttaatgactcagatactgaaggagatggctctccgaaacgt
agcattgaaaaaccagtgaagaaacttaaacttgatcaaagtgaagaagatgacgaaggt
agtggtgttgatgatgaagatgacagctcaaagagactaaagaaatttaagtttcaaaag
tcagaagataatgctgaagggagaaatgtttcttctatttcatcacagaaacctagtaag
gtatctacctgtgttgatgttggcaaaagctttgaaaaaaacggaagttggttacataac
cgtttggaattcctaaaaccagaaaaaattcgtgatgctaaaaaacgtcgaccagatcat
cctgattatgatccaaagacattacatgtacctgaagaattccttaattctcaaacacca
gctcatcgccagtggtggattatgaaaggttcacattttgattgtgttcttttctttaaa
gttggaaaattttatgaattatatcatatggatgcagtagttggtgtcaattacttagga
ttttcttatatgaagaatgaatttgcccattctggttttcctgaaagtgcatatggaaga
atggcaagtacattggtggaaaatggatttaaagttgcaaggattgaacaaacagagaca
cctgaaatgatggcccaacgatgtaaaagtataaaacctacaaagtttgataaggttgtt
agcagagaaatttgccaaatatctaccagaggcacatgtgtttatggtccacagaataca
gatgccagacaagctatgccatgctatatgattgcaattgtgatgagagatttgcctaat
tgccaaaaacgctttggaattagttttgttgatacttcaataggtgtttttcatataagt
gagtttgatgatgacaaacattgctcacgattcttggcattgcttgctcaacatccccct
ggcttgattttgactgaacgtggaaatctgaacttaaaagatttggaattgttgaaacga
acaatcgggaatgtacggcacgatattcttactccagaatctcagttttatagtgcccaa
acaactataaaaaatctctcatgtggtccatactttttaaacaactctggtgaactggaa
tggccatcagcattcaatgaattaatatcagatggaacatctaaattagaatatgaatta
ggtttaaaggctttaggagcatgcatgtggtatttaaaggattctcaacttgacatacaa
gttttatccctcaagaagtttcaaatttacagaccagttgatttaaataatgataaaaac
atacaacgcgactttatggttattgatgctgttaccattgaaaatctaaaacttcttgga
ggtcagtgttcactgcagaaagttatagatcattgtgaaacagcttttggaaaaagattg
atgcaacagtggatctgtcggcctctttgcaacgtggagaaaataattgaacgtcaaaaa
gcggtgagtgaattggtacataagggagagatgcttcaaagtgcaagagctattttaaaa
cgtttacctgacttagaaagacagttagcaaagattcatacatttggaaataaatattat
gctgaaaaccatcctgacagtagagcaattttttatgagtcacaaacgtatactaagcgt
cgaatacttgatctcgttgataccataaatggatttgataaagctcgagcaatttcagaa
atttttaaggattgcgaatctagattcctaaggaaactaactcaacatcctccaaaggga
atgtttattgacttatcagaagccattcaattctttgtaaatgcagtagacctagaggaa
gcgaaaaaggaaggtaaaataattcctcaaagtggtgtagacaaagattttgacaatgtt
aatgatgaaatatcaaatttaaataaacaactgaaaaaatatttaaagaaacaagaggat
ttttttggttgttctattcattattttggaactgacaaaaagcgctttcaattagaaatt
cccgaaagccgaagtcataaagtcacatcggaatatatgtttgagggagcaagaaaagga
aaaaatgctgttaaacgctattctactctagttacaaaaaaatttttagcagacatgtta
aaattagaagcagagagatctaaaattattcaagatttaaatcgacgtatttttgaaaaa
tttagctgcaggcaggagtcatgggagcagattatccattgtctaacaactttagatgcc
atttgctctttagcagagtttgcaagaagttactcagaagagacatgtgtacctaatgta
cttccattttctgaaaagccctacataaaaattaaaaatggacggcatccttgtattaac
aatgttgaaaactttgttcccaatgatattgaattaggaacaaaagaccacccatgcgtt
ttacttcttacgggcccaaacatgggaggtaaatctacattaatgagacaaactgctgtt
ataatgatcctagcccaaatgggaagttttgttccggcttcatcgtgtgaaatgacggtg
gtagacagaatattcacccgtttaggggcccaagataatatccttcaaggccagtctaca
tttttcgttgaattatctgaagcttcagctattcttcaacatgcaactgtaaattcattc
gctcttatcgatgaattggggcgcggaacatccacccacgacggtgcagcagttgcaaca
gcttacgttcgcaaactagttgatataaattgccgcactgtcttctcaactcattatcac
accttggtggatcattatagtacaagatttgatgtacagttgggacacatggcatgtatg
gttgaaaatgaaggagatgttattgaggagacagttactttcttgtataaaatgatgaaa
gggcagtgtccgaaatcttacggttttaatgtagctaagttagcaggcttgccccagagt
atacttatcagggctcatgcagtggcccttgattttgaaaatacaaccaaacagcggtta
ttatgctctaaaattgtagggtcagatgccaactctataaggtcagtattattacaagta
aaataa
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