Agrilus planipennis (emerald ash borer): 108738914
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Entry
108738914 CDS
T07419
Name
(RefSeq) uncharacterized protein LOC108738914
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108738914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apln03021
]
108738914
Enzymes [BR:
apln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108738914
Transcription machinery [BR:
apln03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108738914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PDZ
DEP
Dishevelled
DIX
PDZ_6
Nop14
Motif
Other DBs
NCBI-GeneID:
108738914
NCBI-ProteinID:
XP_025830755
UniProt:
A0A7F5QZL2
LinkDB
All DBs
Position
Unknown
AA seq
2252 aa
AA seq
DB search
MSLFRAMRKTISSNSYLICGIIIGILISQGLNNLDCDKSIRIFEETQFVNEENVLPNVEV
RVPNGKVQVNVVKKVVEEKKTEKRITRPRYYSTELGIREKLFVGILTAEERLNTQCIYLN
RTIGHCLDQIKFFISVHSKPKGEYSLTNIVGFTDTRLKYKPFQVIKYLSDNFIQQYDFFF
LMNDYNFLDARRLKDVVNKISISQDVYLGTTAKDSSFCDLNAGIVLSNSVVTSIKNNLEW
CIKYAISEDHSENLGRCIHFSTGLECQEQVQSQSLNSYKLKHFGLKKHFDKLSRSEEFNK
ALSIYPVLQEHEFYLLNSYFSRLRLEEINEKIEKLSFDLSNSWPPGEKPSVKPATRFDLP
RQIYFNTTHMFFPDDFTNIRPHKTPDFEDIQKIISAVVEKVHNDNPSGFMFRRLINGYRT
FDWSRGLDYVVDLGFRDLNTGKEVVKRFEVCKPLGKVEFVSAPYVTESTRVIMLVPVQET
EAEMAHSFVNNFEKTFMQNKHKVLLVLAFLYRYGEPSKGSEDVFKQLKDDAQRLTSEYRS
EDSKIIWVSVRMPKPKDDGSDERIDLDENKLMQFAVVDLALKKIGADNLMLVLDVYAEPG
VTFINRVRMNTVVNFQIFNPIPFRQYDPKVSKVNTADITKDSGHFDKEEYKYISFYGRDY
VNMRRKSEMELPIVKADSDIEKLFQIPKGTETTVFGMFVKYCKGLHAMRATETALIVKYH
LERGPRENLFIGSKTQLAKMILSNEDRIGFKLYVVKEEIIDDTAHLPCFNGRVVSWLVSA
EGSNQSDGGSQCTDSVTQPEQRLPPQPPDSVCTDTESIISSRQARRHHKYPSRINGHMPR
LYETSSMVSSDLETTSFQSETTGRHTALSECSSVSRLHVANRKRPQRRRKQRLQAMSRTS
SYSSITDSTMSLNIITVTLNMDTVNFLGISIVGQSNKGGDGGIYVGSIMKGGAVALDGRI
EPGDMILQVNDVNFENMSNDEAVRVLREVVQKPGPIKLVVAKCWDPNPKGYFTIPRTEPV
RPIDPGAWVAHTAAVRGDPVVRPPSSSTVSSASITSTIPANERECLLELEEPLTINTPMA
TVVQAMQRPDSGLEIRDRMWLKITIPNAFIGTDMIDWLLTHVEGFQDRRDARKYASHLLK
AGFIRHTVNKITFSEQCYYIFGDLCSAMSNLKLQEDADSVGPLPNVPNYMPYSGTYNPLE
YMPMPFYTASEHTVYGYNREESVLSGSGGSSNGSDHLKDPVAQSSPSDSDLTSLGPRSAL
PMATGNGNGSSNGSDQSSGTQVAAQSKDIAGSRQSFKIAMVHVSQQYLVPKDGTPLGGLI
QDYMVSGVKMTIRGKFFNKVDYQHLVFQALSFKTSEIKLLPPSIIKPACLWSGKQIISTI
IINIIPKNKRPINLTSSAKLGAKYYXEVIIRNGELLVGVIDKIHCGATPYGLVHCMYELY
GGQYAIKLLSAFSKVFTSFLQTEGFTLGVHDILVLPHADKERRKIIKKSRKIGPEVVATA
LDMPKDSSLDEIVEKLEEASARNPKMKAIIDRQYKTSIDEYTNKINKVCLPAGLLCKFPE
NNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPVMISGKSLPSFPVFEFSPRAGGFI
DGRFMTGIKPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVNYDLTVRDSD
KSIVQFLYGEDGMDVCKAQFLQSKQMDFLMENSKAIIDKKIIKSLKKDPEKKRIEEQYKA
IDDWKERHGSPLDKKRTSRFALFSEHAKNKLKIEKLLKIKSNTGRSKLSTAILDLWTSAE
DEIKEGFGGYCRRCPNPVNADYQADCHYGSLSDRMKLLLDNYKSKKPIGKERKSFEDMLK
FKYMQSMCSPGEPIGILAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMYASK
SMKTPSMEIPFKNIPNLEKEAEKLRKKLTRVTLENVLERIEVSAQLGVKPVRQQLYTVKF
HFLPQHLYEHEYPIKAKRVIKAMTTKFFGLFFMTIRRSSKVKSVLVNVEQERKKSRKQIN
EDDDDDDGSAEKDKKFAMRKNEGGSDDDEDSGEEPEDAEDAKQTSKYSQVHEDQEPEEEE
KEKEVSDDEDGEAMDTTVTNEENSKKKKNQEHEEEEEEDEDDTAFSMNSIKGSHNLAQNY
TYDKKKYLWCELTFALPLNWKKLDLRAILKESAAKCVLHEVPDIKRAITYMKKDQLTLRT
DGINIIVSSFLILYNRYIQSVAFEIHLNYFLL
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttcgagcaatgcggaaaactatctcaagcaactcatatttaatttgtgga
attataattggaattttaatttctcagggtttaaataatcttgattgtgataagtctata
cgtatttttgaggagactcaatttgttaatgaagaaaacgtcctgcccaatgtcgaagtc
cgggtgcctaatggcaaagttcaagttaatgttgtcaagaaagttgtggaagaaaagaaa
acagaaaaacgaattacccgaccccgctattattcaacagaacttggaattcgagagaaa
ctgtttgttggaattttaacagcagaagaaagactaaacacccaatgtatttatcttaac
agaacaatcggacattgtctggatcagataaagtttttcatttccgttcacagtaaacca
aagggagaatatagtttaaccaatatagtcggtttcactgacacaagactcaaatacaaa
ccatttcaagttatcaaatacctcagtgacaacttcatacaacagtacgacttctttttc
ttaatgaacgattataattttcttgatgcaagacgattaaaagatgtcgttaataaaata
agcatcagtcaggatgtgtatttagggacaacagcaaaagacagtagcttttgtgactta
aatgcagggatagttttaagtaattcagttgtaacatcgattaaaaataatttggaatgg
tgcattaagtatgccatatctgaagatcatagtgaaaatttaggtaggtgcattcacttc
agtacaggcttggaatgtcaagaacaagtacagagtcagagtttgaacagttacaaatta
aaacattttggtttgaaaaagcactttgataaactttctcgctcagaagaatttaacaag
gcgttatcaatatatcctgtgttacaggaacatgaattttatttactcaattcgtatttt
tcaaggttaagactggaagaaataaacgaaaagattgagaaattatcatttgatctcagc
aacagctggcccccaggggaaaaaccgtctgtcaagccggccacacgtttcgacttgcca
cgccaaatctattttaacaccactcatatgttcttccctgacgattttacaaacattcga
ccccacaagaccccagattttgaggatattcagaaaataatttctgcagttgtcgaaaaa
gttcacaatgacaatccgagtggctttatgttccgaaggcttatcaatggctacaggact
ttcgactggtctcggggactcgactatgtcgtcgatttgggttttagggatctcaacacg
ggaaaggaggttgtaaaaagatttgaagtatgcaaaccgttgggaaaagtggagttcgta
tcggccccatacgtcaccgaaagtacgagggtgataatgcttgtccctgttcaagaaact
gaggccgaaatggcccacagtttcgtaaacaatttcgaaaaaacgttcatgcaaaacaag
cacaaggtgcttctcgtactggcgtttttatatcggtacggcgagcctagtaaagggagc
gaagacgttttcaaacagctgaaagacgacgctcaacgattgacaagcgaatatcgaagc
gaagacagcaaaatcatatgggtgtctgtcagaatgccgaaaccaaaagacgatggtagc
gacgaaagaatcgatttggacgaaaataaattgatgcagttcgcagttgttgatctggca
ttgaagaaaattggggccgataatttgatgcttgttctggacgtgtatgctgagcctggg
gttacttttatcaacagggtgcgaatgaatacagtagttaatttccaaattttcaacccc
attccctttcgtcagtatgacccaaaagtgtcaaaggtcaacactgcagacattaccaaa
gactcgggccactttgataaagaagaatataaatacatttccttttatggcagggactac
gttaacatgcgacgaaagtctgagatggagctaccgatcgtaaaagcagatagcgacatc
gaaaaactattccaaatccctaaaggcactgagacaactgttttcggtatgtttgtgaaa
tattgtaagggattgcacgccatgagagcgactgaaacggcgctaatcgtcaaataccat
ttggagagggggcccagagagaacctcttcattggatcaaaaacgcaactcgccaaaatg
attctgagcaacgaagacaggatcggatttaagctttatgttgtgaaagaagaaatcatc
gacgacactgctcatttaccatgttttaatggtagagttgttagttggttggtgtcagct
gaaggttcaaatcaatcagatggtggttcacaatgtacagacagtgtaacacaaccagaa
caaagactgccaccccaaccaccagattcggtatgtacagacacagaaagcattataagt
tctcgtcaggctcgcagacaccacaaatatccttcacgtatcaatggacacatgcccagg
ttatatgaaacgtcttcaatggtaagttcagatttggaaacgactagttttcaatcagag
accacaggacgccacacagcgttatcagaatgttccagtgtcagtaggttgcacgtagcc
aatagaaaaagaccacaaagaagacggaaacagagactgcaggcaatgtcacgaaccagt
tcgtattcaagtataacggactccacgatgtctttgaacattataacagttacgttgaac
atggacacagtgaattttttaggcatctctatcgtaggacagagtaataaaggtggagat
gggggaatttatgtaggatcaataatgaaaggaggtgccgtggccctagatggtagaatc
gaacctggggacatgattttgcaagtgaacgacgtcaatttcgagaacatgtccaacgat
gaggccgtcagggtgctgagggaagttgtacaaaagccaggacctattaaattggttgtt
gcaaagtgttgggacccaaatccaaaaggttactttacaattcctaggactgaacctgtt
cggcccattgatcctggggcttgggtggcgcacacggccgcagttaggggagatccggtg
gtcaggccacccagtagttcgacagtatctagtgcgtcgattaccagcaccattccagct
aacgaaagggaatgtttacttgaattagaagagcccttgacgataaacacgccaatggca
acggttgtgcaggcgatgcagaggccggacagcggtctcgaaatccgagaccgcatgtgg
ctaaaaataacgataccaaacgcattcataggtaccgacatgatcgactggcttttgacc
cacgtcgaaggatttcaggatcgccgggacgcccgcaagtacgcgtcgcacctcctgaag
gccggtttcatacgtcacacggtcaataagatcacgttctcagagcagtgctactacata
ttcggtgacctctgctcggccatgtcaaacctcaaactgcaagaggacgctgactcggta
gggccgttgccaaacgtgccgaattacatgccctacagcggcacctacaaccctctggag
tacatgccgatgcccttttataccgccagcgagcacacggtgtacggatacaacagggag
gagtctgtcctcagcggaagtggagggtcgtcaaacggttcggatcacttgaaggatccg
gtggcgcagagcagtccgtctgacagcgatctgacgtcattggggccgaggtcggcgttg
cccatggccacggggaatggtaacggatcgtcgaacgggtcggatcagagcagcgggacg
caggtggcggcgcaatcgaaagacatagccggtagtagacaatcatttaaaattgctatg
gttcatgtttcgcagcagtatttagttcctaaggatggtactccattgggtggtttgata
caagattatatggtttctggggtgaaaatgaccatcagggggaaattttttaataaagtt
gattatcaacatctagtatttcaagcgttgtctttcaagacttcggaaattaaattgtta
cctccgtcgatcatcaagccggcttgtctttggtctgggaagcagattatttccactata
attatcaacatcattcccaaaaacaagcgtcccataaacttgacttcatctgcaaaactg
ggagcaaagtattatncagaagttataataagaaatggtgaattattggtaggagttata
gataaaatacattgtggggcaacgccttacggtcttgttcattgtatgtacgagttgtat
ggtggtcagtatgccataaaattgttgagtgccttctctaaagtgttcacgtcgttcctg
caaacggaaggatttactcttggggttcacgacatcctggtgcttccccatgcggacaaa
gaacgccgtaaaataataaagaaatcgcgtaaaatagggcctgaagtcgttgcaacagct
ttggacatgcccaaggactcttctctggatgaaattgtcgaaaaactggaagaggcctct
gcacgaaacccgaaaatgaaagcaatcattgacagacaatataagacttctattgatgag
tatacaaataaaatcaacaaggtttgtcttccggctggtttgctttgtaaatttcctgaa
aacaatctccagctaatggttcagtcgggagcgaagggatcaactgtaaacaccatgcaa
atttcgtgtcttttgggacagatcgaacttgaaggcaaaagaccacccgtaatgatatct
ggaaagtctctgccttcgtttcctgttttcgaattttcaccaagagctgggggcttcata
gacgggcggtttatgacaggtattaaaccgcaagagtttttcttccactgtatggccggc
agagagggtttgatcgacaccgcagtgaagaccagtcgtagcggttacttgcaacgttgt
cttattaagcatttggaaggattgactgtcaattatgatctcacagttcgtgacagcgac
aagagtattgttcagtttctgtatggtgaagatggcatggatgtttgtaaagcccagttt
ttgcaaagtaaacagatggacttcttgatggaaaattcgaaagccattattgacaagaag
atcatcaaaagtttgaagaaggatccggaaaagaagagaattgaagaacaatacaaagca
atcgacgattggaaagagaggcatggtagtcccttggataagaaaaggacgagtagattc
gccctgttttcagaacatgctaagaacaagcttaaaatcgaaaaacttttaaaaatcaaa
tcgaatacaggcagaagtaaattgtctacagccattttggacctctggactagcgccgaa
gacgaaatcaaagaaggatttggtggctattgtcgccgttgtcctaatcctgtgaatgcg
gattatcaagcagattgccactatggttcgttatcagacaggatgaagttgcttctggac
aattacaaaagcaaaaagcctattggcaaagaaaggaagtcgttcgaagatatgttaaaa
tttaaatatatgcaatcaatgtgttcaccgggggaacccattgggattcttgctgcacaa
tctattggggaaccaagtacgcagatgacgctgaacactttccattttgctggtcgtggt
gaaatgaatgtgactctcggtataccccgtttacgtgaaatcctcatgtatgcatcaaaa
tcgatgaaaactccgtctatggaaatacccttcaaaaatataccaaatttggaaaaagaa
gccgaaaagttgaggaagaaactgaccagggtaacgttggaaaatgtactcgaaaggatc
gaagtttccgctcaattgggcgtcaaaccagtcagacaacagttgtacacagtcaagttt
cactttctgccccaacacctctacgaacatgaatatcctataaaggcgaagcgagtgatc
aaagcaatgactacaaaattcttcggcctctttttcatgaccatcagacgatcctcaaaa
gtcaaatcggtcctagtgaacgttgagcaggagagaaaaaaatcgagaaaacaaatcaac
gaggatgacgatgatgatgatggtagtgccgaaaaagacaagaaatttgcaatgagaaag
aacgaagggggaagtgatgatgatgaagactccggtgaggaacccgaagatgctgaggat
gccaagcaaacaagtaaatacagtcaggtgcacgaagatcaggagccagaagaagaagaa
aaggagaaggaagtgtcagatgacgaggatggtgaagcaatggataccactgtaacaaac
gaggaaaatagtaagaaaaagaaaaatcaagaacatgaagaggaagaagaagaagacgaa
gatgatacggccttttcgatgaattctatcaagggttctcacaatttagctcaaaattat
acatacgacaaaaaaaaatatttgtggtgcgaattaacttttgcactgcccctgaattgg
aaaaaattggacttgagggccattttgaaagagagcgccgccaaatgtgttttacacgag
gtcccagacataaaaagagctatcacgtacatgaaaaaagatcagctgaccctaagaact
gacggaattaatataattgtaagttcttttcttattctctataatcgctatatacagagt
gttgcgtttgaaatccacttgaattattttttattataa
DBGET
integrated database retrieval system
