Agrilus planipennis (emerald ash borer): 108743231
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Entry
108743231 CDS
T07419
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03020
RNA polymerase
apln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108743231
09124 Replication and repair
03420 Nucleotide excision repair
108743231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apln03021
]
108743231
03400 DNA repair and recombination proteins [BR:
apln03400
]
108743231
Enzymes [BR:
apln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108743231
Transcription machinery [BR:
apln03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108743231
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108743231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
108743231
NCBI-ProteinID:
XP_018334211
UniProt:
A0A1W4XDJ4
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYEQDDDQFDDEDAAEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPQIELQAEAQHTSGEIENPPRYFLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKDGEDPTETQHQKTFIGKIPIMLRSTYCLLNGLSDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAMKDSKYAYKAEIRSCLEHSSRPTSTLWVNMM
ARGGQAIKKAAIGQRIIAIVPYIKQEIPIMVVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVVQEQNVALNFIGSRGARPGVTKDKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMSTLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGQLLLKKKHIDMLKERDYTNYGWQVLVASG
VVEYIDTLEEETVMIAMSPEDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAECKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIISPGIRVSGDDVVIGKTITLPENDDELEGTTKRFTKRDASTFLRNS
ETGVVDQVMLTLNAEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YHLRGNEVMYNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMSMNIAPRLMVV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaacaagatgacgaccaatttgacgatgaagatgccgcagaaattagttctgaa
ttatggcaagaagcttgttggattgttattaacgcgtattttgacgaaaaaggccttgta
cgacaacagctggacagtttcgatgaattcattcagatgtcagttcaaaggatagtggag
gattcgccccaaatagaattgcaagcagaggctcaacataccagtggtgaaattgaaaac
ccgcctagatattttcttaagtttgaacaaatctatttatcgaagcctacacattgggaa
aaagatggagccccctcacctatgatgccaaatgaagcaagattaagaaatttgacttat
tctgcacccttatatgtagatataactaaaacaattataaaagatggagaggatcctact
gaaacacaacatcagaaaacctttataggaaagatcccaattatgttaaggtctacatac
tgtctactaaatggcttaagtgaccgtgatctaacagaattaaatgaatgccctttagat
cctggaggttatttcattataaatggttctgaaaaagtacttatagcccaggagaagatg
gccacaaacacagtatacgtttttgccatgaaagacagcaaatatgcatacaaggctgaa
atcaggtcttgcttagaacacagttcacgtcctacatccacattgtgggtcaacatgatg
gccagaggaggtcaggccattaaaaaagcagcaattggccaacgtattattgccattgtg
ccatacatcaagcaagaaatccctattatggttgtctttagagccctagggtttgtagct
gatcgagacattcttgagcatatcatttatgattttgaagacccagaaatgatggaaatg
gtaaagccttctcttgatgaagcatttgtggtccaagaacaaaacgtcgctcttaatttt
atcggatctcgaggtgctagacctggggtcaccaaagacaaacgtattaaatacgccaga
gaaattctacagaaggaaatgctgccccacgtcggtgtctctgacttttgcgaaacgaaa
aaggcttactttttggggtacatggtacacagacttctattggctgctctagggcgaaga
gaattagatgacagggatcattatggaaacaaaaggcttgatctggcaggaccattactt
gccttcttatttagaggcctgttcaaaaacctcatgaaagaggtgagaatgtacgcgcag
aaattcatcgatcgtggtaaagatttcaacctcgatttggccataaaaaccaaacttatt
accgacggtctcagatattctttagctactggcaattggggtgatcagaagaaagctcat
caggccagagctggggtgtcccaagtattgaacagactcacttttgcctcgactctatcc
catttacgaagagttaactcgccaattggtagagatggcaaacttgccaaacctcgacag
ttacacaacactttatgggggatgatatgccctgctgaaacgcccgaaggagcagccgta
ggactcgtcaaaaatttggccttaatggcgtacatttctgttggttcccaaccctcgccc
attctggagttcttggaggaatggtctatggaaaatttggaagaaatcgccccatcagct
attgcagacgccacaaaaatattcgtcaatggatgctgggtgggtatccacagagaccct
gaacaactcatgtccactttacgaaaactgagacgtcaaatggacatcattgtatccgaa
gtatcgatgattcgtgatattcgcgatcgtgagatacgaatttacacagacgcaggacga
atttgcaggccgttgctcattgtcgaaaacggccagttgttacttaaaaagaaacatatc
gatatgctgaaagaacgagactacactaattatggttggcaagtattggttgcttcaggt
gtagtggaatacatcgatactcttgaagaagaaactgtgatgatagcaatgtccccagaa
gatcttagacaagaaaaagagtatgcatattgtaccacatacacccattgtgaaattcac
cctgccatgattcttggcgtttgtgcttcgatcattccatttcctgatcacaatcagagt
cccagaaacacttatcagagtgctatgggtaaacaagccatgggagtttacatcaccaat
ttccacgtacgtatggacactctcgcacatgtcttatattacccccataaaccacttgta
actactcgttctatggaatatttgagattcagagaattacctgctggaatcaacagtatc
gtagctattgcctgttacactggttataatcaagaagattccgtcatcttgaatgcatct
gccgttgaaaggggcttttttagatcggtattctaccgatcatacaaagacgctgaatgt
aaacgtattggagatcaagaagagcagtttgagaaaccgacaagacaaacctgccaaggg
atgagaaatgccctgtatgacaaactagacgatgatggcatcatatcaccgggaattcga
gtgtcaggagacgacgttgttattggaaaaacgataaccctcccagaaaatgacgacgag
cttgaaggtaccactaaaagattcacgaaacgggacgcctctacgttcctacgaaacagc
gaaacaggcgtagtcgatcaagtcatgttaaccctaaacgccgaaggttataaattctgc
aagataagggtcaggtctgttaggattcctcaaataggggacaagtttgcctctcggcat
ggacagaaaggaacctgtggaatacagtacagacaggaggacatgccatttacgtgtgag
ggcctgactcctgatataattatcaacccccacgctatcccatctcgtatgactattggt
cacttgattgagtgcattcaaggtaaagtatcggcaaataagggcgaaatcggcgacgcg
acccccttcaatgacgccgttaacgtacaaaagatctcaactttgctccaagaatatggg
tatcacttgagaggaaacgaagtgatgtacaatggtcacacagggcgtaaaattaacgcc
caaatcttcttgggaccgacttattatcaacgtttgaagcacatggtggatgataaaatc
cattcaagagctagaggaccggttcagattttggtaagacagcctatggaaggtagggct
agggacggaggtttgcgttttggggagatggaacgggattgtcaaatttcgcatggagca
gcgcaattcctaagggagagattgtttgaagtatcagatccatacagggtacacgtttgt
aacttttgcggacttatagctatcgccaatttaagaaacaacacgtttgagtgcaaaggc
tgcaagaataaaacgcaaatatcacaaataaggttgccctatgctgccaaattactgttc
caagaattaatgtcaatgaatattgcacctaggttgatggtagtttaa
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integrated database retrieval system
