Ahaetulla prasina (Asian vine snake): 131198596
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Entry
131198596 CDS
T09329
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131198596 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apri03021
]
131198596 (POLR1A)
Enzymes [BR:
apri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131198596 (POLR1A)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131198596 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF787
RnlA-toxin_DBD
Motif
Other DBs
NCBI-GeneID:
131198596
NCBI-ProteinID:
XP_058039381
LinkDB
All DBs
Position
4:52688939..52742689
Genome browser
AA seq
1707 aa
AA seq
DB search
MAAKEVPWRRLTGLSFGMYTDAEIRKLSVKSITNPLFLDNAGTPSPNGLYDLALGPLDNK
EVCVTCLQDFNNCPGHLGHIELPLTVYNPLFFDKLFLLMRGSCLNCCHLTCPRAAIHLLL
NQLKLLEIGLIQEVHDLEAILNRFLDESSDAIGTEIEEMLSCHTKVMLQNNQLRDYSAHV
KNVCECRSKLISQFWKFHMTSKKCPNCKAGRSLIRKEHNSKLTVTYPTVVSQKSGKQTIV
EEVATVDETQLGKRGYMTPLTAKEHIEALWKNEGFFLCKLFSGMAVTDDSTFNPEMFFLN
KLVVPPSRYRPVNCVGDQMFANGQTVNLQAVMKDALLIRKLLAFIAQEQSHSLLTENGNL
KTMIDQPLESLDHSVLATIPGQTTADKLYNSWIRLQSHVNILFDSDMDKLISEKYPGVRQ
ILEKKNGLFRKHMMGKRVDYAARSVICPDMYIQTNEIGIPMVFATRLTYPQPVTPWNVQE
LRQAVINGPNEHPGASMIINEDGSRTILSTTSQTQREAIAKQLLTPSTGAPKPGIKIVCR
HIKNGDILLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
NELGRAEAYVLACTDEQYLVPKDGKPLAGLIQDHMVSGTSMTTRGCFFTREQYVELVYQG
LMDKKGKVKLLPPAIIKPRCLWSGKQVVSTLLLNVIPEDHIPLNLSGKAKISEKAWTTAS
ACRIHRSELDSMCESQVLIRNGELLCGVLDKAQYGSSAYGLVHCCHEAYGGETSGKLLTA
LARIFTAYLQFYRGFTMGVEDILVKYKADQKRCSIIKESTNCGIKAIRAAFNLSQTSSCE
ELRSKWQDAHLQKDQRDFNMIDLKFKEEVNCCNNEINKVCMPLGLHRSFPDNNLQLMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPKSGGFVASRFLTGIK
PSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLIVHYDMSVRDSDGSVVQFLYG
EDGLDIPKTQYLHPKQFPFIADNHKVIWKSKHLDEAMPKMNPQQASKQFKLVKKWQAKHQ
HSLRRKGGFLLFSQEMLADMKAEISTEGISVYGRDPAALKLLNMWYELNEKTRRKYRKRA
ARCPDPSLSVWRPDIYFASVSETFENEVKTFLGEWDAQNRLNYSKSELSSQRLQELLYLK
WQQSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAKI
KTPMMSIPVLNIKKAHKRVKRLKKKLSRVCLGEVLHKVNIEETLCLEGTLSKHRIYTIRF
SFLPYECYQEEKCVKPRDILHFMETRFFKMLLETIKRKSLKLASYNTVSTRKAIQKDLEA
EEEIGASQEDQDDNEAETEDRFPDNGMTEGDADATDTKRKENQEDEVDYESEDDHEMGDD
DDIPDQEMTAPDETNLEELETQDEIYSPSSNQRARNKRKGWNEMAQHRINAVLEAHDAVE
KYTYDTDNELWCEVSLKLSLTKEYFDLASLVTSLANSAVIQETKGITRCLLNETNNKNGE
VVLTLQTEGINLPELFHYSDIFDMNKLYCNDIHAMASTYGIEAALKILEREIKDVFAAYG
IVVDPRHLSLVSDYMCFEGVYKPLNRYGMQSNSSPLQQMTFETSYKFLKEATMLGSHDEL
LSPSACLVVGKVVKGGTGLFDLKQPLK
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaggaggtgccgtggaggcgcctgacggggttgtcttttgggatgtatacg
gatgcagagatacggaaactgagtgtaaaatctataaccaatcctctttttcttgataat
gcgggtactccatccccaaatggactatatgatttggctttgggtccgcttgacaacaag
gaagtttgtgttacttgcctgcaagacttcaacaattgtcctggtcatctaggtcacata
gaactacccctcactgtttataatcctctcttttttgataaattattccttctgatgcga
ggttcctgtttgaattgttgccatctaacatgtccacgagctgcaattcatttattatta
aatcagctaaagctactagaaataggattgattcaagaggtccatgatcttgaagcgatc
ctgaataggtttttagatgaaagctcagatgcaattggtactgaaattgaagaaatgtta
agttgccacacaaaggttatgcttcaaaataatcaacttagagactacagtgcacatgta
aaaaatgtatgtgaatgtagaagtaaacttatctctcaattttggaaatttcacatgact
tcaaagaaatgtccaaactgcaaagcaggaagatcacttattcgcaaagaacataacagc
aagctcactgtaacttatcccactgtcgtatctcagaagtcaggcaaacagacaatagtg
gaggaagtagcaactgtagatgaaactcagctgggaaaacggggctacatgacacctttg
actgccaaagaacacattgaagctttgtggaagaatgaggggtttttcctttgcaagctt
ttctctgggatggcagtcactgatgattcaactttcaatcctgaaatgtttttcttaaat
aaacttgttgtaccaccttccagatatcgtcctgtgaattgtgttggagatcagatgttt
gcaaatggccaaacagtgaacttacaagctgttatgaaggatgccctccttattcggaag
cttctggctttcattgctcaagaacaaagtcactcattactgacagaaaatggaaatctt
aagacgatgatagaccagcccttggaatctctagaccattctgtcttggcaacaattcct
ggacagactactgcagataagctttataacagttggattcgtcttcaaagccatgttaat
attttgtttgacagtgacatggataaactaatatctgaaaaatatcctggtgtaagacag
attcttgaaaaaaagaatggcctgtttcgtaaacatatgatgggaaagagagtggattat
gctgcccggtcagtcatttgtcctgacatgtacattcagacaaatgaaattggcattcct
atggtatttgctactagattgacctatcctcaacctgtcacaccctggaatgtccaagaa
ttgaggcaagcagtcataaatgggccaaatgagcaccctggggcttccatgattatcaat
gaagatgggtctcgtacaatattgagtacaactagccagactcagagggaagccatagct
aagcaacttttaaccccttccactggagcaccaaaaccagggataaaaattgtgtgccgc
catattaagaatggtgatatccttctgctgaaccgacaacccacccttcatagaccctcc
atccaagcccatcgagcaagaatacttcctggagagaaagttctgaggcttcactatgcc
aactgcaaagcctataatgctgattttgatggtgatgagatgaatgctcatttccctcag
aatgagctgggccgagccgaagcctatgtattggcctgtacagacgaacagtatctggtt
cctaaggatgggaaacccttggcaggattgattcaagaccatatggtgtctggtactagc
atgactacgcgaggctgtttcttcactcgagagcagtatgttgagctagtgtatcaagga
ctgatggacaaaaaaggaaaagtaaaactgctacctccagctattataaagccacgatgc
ttatggtcaggaaagcaggttgtttctactttgttattaaatgtaattccagaagatcac
attccactaaatctatctgggaaagctaagatcagcgaaaaagcctggacaacggcatct
gcctgtagaattcatagatcggaacttgactctatgtgtgaatctcaggttcttattaga
aatggagaactgctctgcggggtcttggataaagctcaatatgggagctctgcctatggt
ttagtccactgttgccatgaggcttatgggggtgagactagtgggaagttgctaactgct
ctggctcgaatcttcactgcctatctacagttctacaggggttttacaatgggagttgag
gatattttggtcaaatataaggcagatcagaagaggtgcagcatcattaaggaaagtacc
aactgtggtataaaggccattagagctgcatttaatctatcccaaacctcgtcctgtgaa
gaacttcgaagtaaatggcaggatgcccatcttcagaaagatcagagagattttaacatg
attgatttaaagttcaaagaagaagtcaactgttgcaacaatgagatcaataaggtgtgc
atgcctcttgggcttcaccgaagtttcccagataataatttgcagttgatggtacaatca
ggagccaaaggatctactgtgaatactatgcagatttcttgcttgctgggccagattgaa
ttagaaggtcgaaggcctcctttgatggcatctggaaaatcattgccatgtttccagcca
tatgacttttcccccaaatcaggaggatttgtagctagtagatttcttactggcatcaag
ccttcagaattcttcttccactgtatggctggtagggaaggtctggtggatactgcagtt
aaaaccagccgatcaggatatcttcaaaggtgtatcataaaacatttagagggactgatt
gttcattatgacatgtctgtacgagatagtgatggcagtgtggttcagtttctgtatgga
gaagatggactggatatccctaagacacagtatttgcaccccaaacaatttcctttcatt
gcagataatcacaaggtgatttggaaatctaagcatttagatgaagctatgccaaaaatg
aatcctcagcaagcttctaagcagtttaaattagtcaagaaatggcaagcaaagcatcaa
cactctttgagaaggaaaggaggctttttgctgttttcccaagaaatgttggctgatatg
aaagctgagatctctacagaaggaatatctgtatatggccgagatcctgcagctcttaag
ctgttaaatatgtggtatgagctgaatgaaaaaacccgcaggaagtatcggaagagggca
gcaaggtgtcctgatcctagcctttcagtctggcggccagatatttattttgcatcagtg
tctgaaacatttgaaaatgaagttaagactttccttggagagtgggatgctcagaatagg
cttaactatagcaaatctgaactttcttcacagagattacaggagctgctctatttaaaa
tggcaacaatcactctgtgaccccggagaagctgtgggacttcttgctgctcagagtatt
ggggaaccctccactcagatgaccctgaatacctttcactttgctggaaggggtgaaatg
aatgttactcttggtatcccaaggttgcgggagattctgatggtagctagtgctaaaatc
aaaactcccatgatgagcattcctgtccttaatatcaagaaagctcacaaaagggtgaaa
aggctcaagaagaagcttagcagagtgtgcctaggtgaggtgttacacaaagtgaatatt
gaagaaactttgtgtttggaagggacattaagcaagcatcgcatctacaccatcagattt
agttttctgccttatgaatgctatcaagaagaaaaatgtgtgaagccaagggacatctta
cattttatggagaccagattctttaaaatgttgctggaaacaattaaaagaaagagttta
aagttggcatcttataacactgttagcactcgaaaagcaattcagaaagatttagaagct
gaggaagaaattggtgcttcacaagaagatcaggatgacaatgaagctgaaactgaagac
agatttcctgataatggaatgactgaaggtgatgctgatgctacagatacaaaaagaaaa
gaaaatcaagaagatgaggttgattatgagagtgaggatgatcatgaaatgggtgatgat
gatgatattccagatcaggaaatgactgcaccagatgaaacaaatcttgaagagctggaa
actcaggatgagatttattctccttcctctaatcaaagggctcgaaacaagagaaaggga
tggaatgaaatggcacagcatagaattaatgctgtactggaagcccatgatgctgtagaa
aaatatacatacgacactgataatgaactgtggtgtgaggtttcactaaagctttcgctg
acaaaggagtactttgatcttgcatcacttgtgacatctctggcaaatagcgctgtcatc
caggagacaaagggaataacacgatgtctcttaaatgaaaccaacaacaagaatggagaa
gtggtactcactttgcaaacagaagggataaatcttcctgagctcttccactattctgat
atttttgatatgaataaactttattgcaatgatattcatgcaatggcaagcacctatggg
attgaagctgctttgaaaatcctggagagagagattaaagatgtgtttgctgcatatgga
attgtggttgatcctcgacatctctccttggtgtcagactacatgtgctttgaaggtgtt
tacaaacctttgaatcggtatggaatgcagtccaattcctcccccttgcaacaaatgact
tttgagacaagctacaagtttttgaaagaagcaactatgttgggatcccatgatgaactt
ctatctccttctgcttgcctggtggtaggaaaagtcgtcaagggaggaactggcttattt
gatcttaagcaaccactaaaatag
DBGET
integrated database retrieval system
