KEGG   Auxenochlorella protothecoides: F751_2750
Entry
F751_2750         CDS       T04132                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03020  RNA polymerase
apro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    F751_2750
  09124 Replication and repair
   03420 Nucleotide excision repair
    F751_2750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apro03021]
    F751_2750
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_2750
Transcription machinery [BR:apro03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     F751_2750
  RNA polymerase III system
   RNA polymerase III
     F751_2750
  RNA polymerase I system
   RNA polymerase I
     F751_2750
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      F751_2750
SSDB
Motif
Pfam: DNA_RNApol_7kD DUF5816 zinc_ribbon_13 Zn_ribbon_recom DZR HypA UPF0547 Zn_ribbon_SprT YjdM_Zn_Ribbon HVO_2753_ZBP ZnF_RZ-type DUF6237
Other DBs
NCBI-GeneID: 23614141
NCBI-ProteinID: XP_011400746
UniProt: A0A087SPV5
LinkDB
Position
Unknown
AA seq 59 aa
MQAPGGAFETPAPVAVVYICGDCGAENTIRAVDVIRCRECGYRILYKKRTKRVVQYEAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atgcaggcccccggtggcgcctttgaaacgccggctccagtggccgtggtgtacatttgc
ggcgactgcggggcagaaaacaccatcagagcagtggatgtcattcggtgtcgtgagtgc
gggtaccggattctgtacaagaagcggacaaagcgtgtcgtccagtacgaagctcgg

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