KEGG   Auxenochlorella protothecoides: F751_6084
Entry
F751_6084         CDS       T04132                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03020  RNA polymerase
apro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    F751_6084
  09124 Replication and repair
   03420 Nucleotide excision repair
    F751_6084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apro03021]
    F751_6084
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_6084
Transcription machinery [BR:apro03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     F751_6084
  RNA polymerase III system
   RNA polymerase III
     F751_6084
  RNA polymerase I system
   RNA polymerase I
     F751_6084
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      F751_6084
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 23617475
NCBI-ProteinID: XP_011400480
UniProt: A0A087SP49
LinkDB
Position
Unknown
AA seq 151 aa
MAAKKAQVLNDIFEVLEIDPDGKKFDKVSRIRARSDLFEMDMLLDVNVDIYPVDLGDKLA
LCLATTLNTDGTPSGASYDSVRPTARRTLADDFEYVMHGKIFKFKDSSSGGQVRAEVFVS
FGGLLMQLIGDPKRLADLDVDEDIFLLLKKV
NT seq 456 nt   +upstreamnt  +downstreamnt
atggcagcgaagaaggcccaggtcctgaacgatatctttgaggtgctagagatcgacccc
gatggcaagaagtttgataaagtgagtcgaatcagggccaggagtgacctgttcgaaatg
gacatgctcctggatgttaatgtagacatctaccccgtcgacctgggcgacaagctggcc
ctctgcctggccaccaccctgaacacggacggcaccccctccggcgccagctacgactcc
gtccgccccaccgcgcggcgcaccctggcggacgacttcgagtacgtgatgcacggcaag
atcttcaagttcaaggacagcagctctgggggccaggtcagggctgaggtctttgtcagc
tttggcggcctgctcatgcagctcatcggcgaccccaagcgcctcgctgacctggacgtg
gatgaggacatcttcctgctgctgaagaaagtatga

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