Aspergillus puulaauensis: APUU_51019A
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Entry
APUU_51019A CDS
T08081
Symbol
RPB1
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
apuu
Aspergillus puulaauensis
Pathway
apuu03020
RNA polymerase
apuu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apuu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APUU_51019A (RPB1)
09124 Replication and repair
03420 Nucleotide excision repair
APUU_51019A (RPB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apuu03021
]
APUU_51019A (RPB1)
03400 DNA repair and recombination proteins [BR:
apuu03400
]
APUU_51019A (RPB1)
Enzymes [BR:
apuu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APUU_51019A (RPB1)
Transcription machinery [BR:
apuu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
APUU_51019A (RPB1)
DNA repair and recombination proteins [BR:
apuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
APUU_51019A (RPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
64976313
NCBI-ProteinID:
XP_041558502
LinkDB
All DBs
Position
5:complement(join(2664644..2664659,2664717..2669581,2669642..2669712,2669771..2669927,2670007..2670135))
Genome browser
AA seq
1745 aa
AA seq
DB search
MANVYFPYSKAPLRTIKEIQFGLFSPEEIKRMSVVHVEYPETMDEQRQRPRTKGLNDPRM
GTIDRQWNCETCEEGQKECPGHFGHIELATPVFHIGFLTKIKKLLETVCHNCGKIKANTS
DSKFLDALRIRDPKRRFDHIWRLSKDVLICEADPPPDDDEYGKESSKPARHHGGCGNAQP
TVRKEGISLVGTWKPSKSMMDEMDMQQPEKKTLTPQLALNVFRNITHEDVRIMGLSNDYA
RPEWMVLTVLPVPPPPVRPSVLVGGSTSGQRGEDDLTYKLAEIVRANQNVQRCEQEGAPE
HVVREFESLLQYHIATYMDNDIAGQPKAMQKSNRPVKAIRSRLKGKEGRLRQNLMGKRVD
FSARTVITGDPNLSLDEVGVPRSIARTLTYPEVVTPYNIEKLQQLVMNGPNEHPGARYIV
RDNGERIDLRHAKRAGGQQLLYGWKVERHVMDGDVILFNRQPSLHKESMMGHRVRVMPYS
TFRLNLSVTTPYNADFDGDEMNLHVPQSEESRAELSQLALVPHNIVSPQRNGPLMGIVQD
TLCGIYKICRRDIFLSKEQVMNTMMWVPDWDGVIPPPAILKPRPRWTGKQMISMALPSGL
NLLRVDKDGSPLAEKFSPLNDGGLLIHSGQLMYGMLSKKTVGASGGGVIHTIFNEYGSDT
AVAFFNGAQAIVGYWLLHNGFSIGIGDTIPDELTIQRIENCVRVRKQEVEEITTSATDNT
LEALPGMNVRETFESKVSRALNNARDEAGSETEKSLKDLNNAIQMARSGSKGSTINISQM
TAVVGQQSVEGKRIPFGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPTEFFFHAMAGR
EGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIIQFIYGEDGLDGAHIENQ
RVDIIKCSDNQFRDRFRVDLMDPERSLGPEVLEQANEIAGDVEVQRYLDEEWEDLLKSRA
FLRSVAKEDEEMMQLPINVQRILEMARTTFRIREGTISDLHPAEVIPQVQSLLDRLWIVR
GNDDISQEAQDSATLLFKAQLRSRLAFRRLVTEYSMNKLAFQHVLGAIESRFAKAAAAPG
EMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATNIKTPSMTVYQE
PARSYDKEGAKQLRSAVEHTSLRSITEATEIYYDPDIQSTVIENDRDMVESYFIIPEDVT
DDSSRQSKWLLRIILSRPQLLDKGLTVQDVATKIKQAYPKDIAVIFSDNNADEQVIRIRQ
IQDYKEDEEDDDIEYDVTLKKLEQHLLDTLTLRGVSGVERAFINEKSKVRVLEDGSLFTS
KTDPLCKEWVLETSGSSLGEVLAIPGVDASRTYSNQFIEIFEVFGIEAARTAVLRELTQV
LAFDGSYVNHRHLALLVDVMTVRGYLTPVTRHGINRADNGALMRCSFEETVEILLEAAAF
GELDDCRGVSENLILGQMAPAGTGEFDVYLDQGMLNTVVSNNARYGVMGALGAKDAIISD
GAATQYDTGSPMQESAYIGTADPDSNFSPIRQAGAETPGGFTEYQPSGAFGGGFSPAATS
PAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYS
PTSPAFGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAVGG
ARHLSPTSPTSPKYTPTSPGWSPTSPQSYSPTSPNFSGSPTSPGGPTSPGYSPTSPAYSP
TSPRQ
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtctactttccctactccaaggcgcctttgcgcacaatcaaggaaatccag
tttggtctcttctcacccgaggagatcaagcgaatgagtgtggtgcatgtggaatacccc
gagacaatggatgagcaaaggcaacgcccacgaaccaaaggtcttaatgatccgcgtatg
ggaactattgaccgacaatggaactgcgagacctgtgaagaaggtcagaaggagtgcccg
gggcacttcggacatattgagctagccactccggtcttccacatcggtttcttgacgaaa
atcaagaagttgcttgagacggtctgccacaactgtggcaagatcaaagccaacacgtcc
gattcgaagttcttagatgccctgcggattcgagacccgaagcgacgatttgaccacatc
tggcggctttcgaaggatgttttgatttgcgaggcggacccacctccggacgatgacgag
tacggcaaggaaagctcaaaacctgcgaggcatcacggtggatgcggcaatgcgcagccg
accgttcggaaggaaggtatatcgcttgttggaacatggaagccctcgaagagcatgatg
gatgaaatggacatgcaacaacctgagaagaaaactctcactcctcaacttgcgcttaac
gtcttccgcaacattacccacgaagatgttcgcatcatgggtttgagcaatgactatgcg
cgtcctgagtggatggttcttacggtgttgcctgtcccacctcctcctgttcgtcccagt
gtgcttgtcggtggtagcacttctggccaacgaggtgaggatgatttgacctataaactg
gctgaaatcgtccgagcaaaccagaatgtccagcgttgtgagcaggaaggtgccccagag
cacgtcgtgcgcgaattcgagtctttgctccagtaccacattgctacgtacatggacaac
gatatcgccggccagccaaaggctatgcaaaagtctaaccgacctgtcaaagctattcga
agccgcttaaagggtaaggagggtcgtctgcgtcaaaacttgatgggaaagcgtgtagac
ttctctgcacgtactgtgatcactggtgatccaaacctgtcccttgacgaagtcggtgtt
ccaaggagtattgcgaggacactgacttaccctgaagttgtcacgccttacaacattgag
aaactgcagcagcttgttatgaatggcccgaatgagcaccctggcgctcggtacattgtc
cgggacaatggtgagcgcatcgatcttcgacacgcaaagcgggcaggtgggcaacagctc
ttgtatggttggaaagtcgaacgccacgtcatggatggggatgtcattcttttcaaccga
cagccgtcccttcacaaagaatccatgatgggtcatcgcgttagggtgatgccttactcg
accttcaggctcaatctttctgttaccactccttacaacgctgattttgatggcgacgaa
atgaacttgcacgtccctcaaagcgaagagtctcgagcggagctcagccagcttgccctt
gtgcctcacaacatcgtttctcctcagcgaaacggccctcttatgggtattgtgcaggat
actctctgcggtatctacaagatctgtcgccgtgacattttcctcagcaaggagcaggtc
atgaatactatgatgtgggtgcctgattgggatggtgttattcccccgcctgcgatcttg
aagcctagacctaggtggacaggaaagcagatgatcagcatggcgcttccatctggtctt
aaccttctgcgagttgataaagacggctctccacttgctgagaagttctcccctcttaac
gatggtgggctccttattcatagtggacagttgatgtatggaatgctttcgaagaagact
gtcggtgcgagtggtggcggtgtcatccacactatcttcaatgaatatgggtcagatact
gctgttgctttcttcaacggtgctcaagcaattgtcggctactggttacttcacaacgga
tttagcatcggtatcggtgacactattcctgacgagctcacgatccagcgcattgagaac
tgtgtgcgtgttcggaagcaggaagtcgaggaaatcaccactagcgcaactgacaacacc
ctcgaagcccttcctggtatgaacgtgcgtgaaacctttgagagtaaggtctcacgagcg
cttaacaacgctcgtgatgaagctggtagcgagaccgagaaaagtttgaaggatttgaac
aacgccattcaaatggctcgttctggttcgaagggttcaacgatcaacatctcacagatg
actgctgtggtgggtcaacaatccgttgagggtaaacgtattccgtttggtttcaaatac
cgcactttgccgcactttacgaaagatgactactctccagaatccagagggttcgttgag
aactcatatcttcgtggcttaacccccacagagttcttcttccacgctatggctggtaga
gaaggtttgatcgatactgctgtcaagaccgccgaaactggttatattcagcgtaagctg
gttaaagcccttgaagaggttatggtcaagtatgacggcaccgtccgtaactcgttgggt
gatattattcagttcatttacggagaggatggtctcgatggtgcacatatcgagaaccag
cgcgttgatattatcaagtgctcggacaaccaatttagagatcggttccgtgttgacctc
atggatcccgagcgcagcctcggccctgaagtgttggagcaagccaacgaaattgctggc
gatgttgaggtccagagatacttggacgaagaatgggaggacctactaaagtctcgggcc
ttccttcgcagtgtggctaaggaagacgaggagatgatgcaacttcccatcaacgttcag
cgtatccttgaaatggctcgaaccaccttcagaattcgcgaaggaacaatcagtgatctg
caccctgcggaagtcattcctcaggtgcaatctctacttgatagactgtggattgtgcgc
ggtaacgatgacatttcccaggaggcacaagacagtgcaactctgctcttcaaggcccag
ctgcgcagtcgccttgcattccgcagattggtaaccgaatactccatgaacaaacttgcg
ttccaacacgttcttggagccattgagtctcgttttgccaaggcggccgcggccccaggc
gagatggtcggtgttctggccgctcagtccattggtgagccggctactcaaatgacattg
aacaccttccactttgctggtgtttcgtcgaagaacgttacccttggtgtgcctcgtcta
aaggaaatcctgaacgttgcgaccaacatcaagaccccgtccatgactgtctaccaagaa
cctgcacgttcttatgacaaggaaggggccaagcagcttcgtagcgctgttgagcacacc
agtttgcgatccatcacggaggcgacggagatctactatgatcctgacatccagtccaca
gtcatcgaaaacgaccgggatatggttgaatcttacttcattattccggaagatgtcacc
gatgactcgtctcgccagtctaagtggttacttcgtatcattctgagccgcccgcagctt
cttgacaagggcctcactgtgcaagacgtcgctactaagatcaaacaggcctaccccaag
gatatcgctgtcatcttcagtgacaacaacgcagacgaacaggtcatccgtatccgccag
atccaggattacaaggaagatgaggaggacgatgacatcgagtacgatgttacattgaag
aaactggagcaacaccttctggacacactgaccctgcgtggtgtttctggagttgagcgt
gccttcatcaacgagaagagcaaggtccgtgtcctggaagacgggtccttgttcactagc
aagacggacccgttgtgtaaagagtgggtgcttgaaaccagtggttcttctcttggtgaa
gttctggcgattccgggcgtcgatgctagccgaacatactcgaatcagttcattgaaatt
tttgaggtgtttggtattgaggcagcgcgaactgctgttctccgtgagttgacgcaagtg
ttggctttcgacggatcctacgtcaaccaccgtcacttggcacttttggtcgacgtgatg
actgtgcgaggctacctgactccagtcactcgtcacggtatcaaccgtgccgataacggt
gcgcttatgcgttgctctttcgaagagacggttgagattcttctagaggccgcggccttt
ggtgaacttgacgactgccgtggtgtatcggagaacttgattctgggacaaatggcaccc
gcgggtactggcgagttcgacgtctaccttgaccagggcatgctcaacactgttgtctcg
aataatgctcgctacggagtcatgggtgctctgggtgcaaaggatgcaattatttcggac
ggcgctgcgacgcagtacgatactggctcgcctatgcaggaaagtgcctatattggtact
gccgaccccgactcgaacttctctcccatccgccaggcgggtgctgagactcctggtggc
tttacggagtaccagccctcaggcgcctttggtggtggattcagtcctgctgccaccagc
ccggcaggatactctcctagcagtccgttcagtgccaaccctacgtcgcctggatattct
ccaacgtccagctactctcctacgtcgccaggcatgggtatcaccagccctcggttcatg
acatctccgggattctctcccgccagtccgtcatttgcaccgacatcgccggcctactct
ccaacgtcgccggcgtttgggcaggcttcaccgacgtcaccctcgtattcccctacttca
cccgggttctcaccgacttctccaaactacagccctacctcgccgagtttcagtcctgct
tcaccagctttcagcccaacctcgccaagttacagtcctaccagtccggctgttggtggt
gccagacacttgtctcctacttcgcctacctctccgaaatacacccctacgtctcctggg
tggtcgcctacaagcccccagtcgtactctcccacgtcccctaacttttccggctcgccg
acctcgcctggaggcccaacatctcctggttacagcccgacgtcgccggcctatagccct
acatctcctcgccagtga
DBGET
integrated database retrieval system
