Aquimarina sp. AD10: D1816_24350
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Entry
D1816_24350 CDS
T05712
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aqd
Aquimarina sp. AD10
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqd03009
]
D1816_24350 (rimO)
Enzymes [BR:
aqd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D1816_24350 (rimO)
Ribosome biogenesis [BR:
aqd03009
]
Prokaryotic type
ribosomal protein modification factors
D1816_24350 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
DUF6448
Motif
Other DBs
NCBI-ProteinID:
AXT63340
LinkDB
All DBs
Position
5829454..5830755
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AA seq
433 aa
AA seq
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MRTKTLKKNKINVVTLGCSKNVYDSEVLMGQLKANNKEVVHEEEGNIVVINTCGFIANAK
EESVNTILEYVQKKDEGTVDKVFVTGCLSERYKPDLQEEIPDVDQYFGTTELPGLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIEELVIEAEKLA
ADGVKELVLIAQDLTYYGLDLYKERKLADLLRSLAKVEGIEWIRLHYAFPTGFPMDVLAV
MKQESKICNYIDIPLQHISDPILKSMRRGTTKAKTTKLLKEFREAVPEMAIRTTLIVGYP
GETQEDFETLRSWVKEMRFERLGCFTYSHEENTHAFNLEDDVPEDVKMERANEIMEIQSQ
ISWELNQQKIGKEFKIIIDRKEGNYFIGRTEFDSPDVDNEVLIDATKHYLKTGDYTTVKI
YEAEDFDLYGEPI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaagactttaaagaaaaataaaatcaacgttgttacattaggctgtagtaag
aatgtctacgatagcgaagtgttaatggggcaattgaaggcgaacaacaaagaagttgtt
catgaggaagaaggaaacattgtggttattaatacttgcggttttattgctaatgctaag
gaggagtctgtaaatactattcttgagtatgtgcaaaaaaaagatgaaggtactgttgat
aaagtatttgttaccggttgtttatcagaacgctacaagccggatttacaagaagaaatc
cctgatgtggatcaatattttggtacaacagaacttcctgggttattaaaggctttagga
gcagattataaacatgaattgataggagagcgtcttactactactccaaaaaattatgct
tatcttaaaattgcagaaggttgtgatcgtccttgttcattttgtgcgatacctttaatg
agaggaaagcataaatccacgccaatagaagagctcgttattgaagcagaaaaattagct
gcagatggagtaaaagaattagtgttaatagctcaagatcttacatattatggtttagac
ttgtataaagagcgaaaattagcagatttattaagatctcttgcaaaagtagagggtata
gaatggataagacttcattatgcatttccaacagggtttcctatggatgtattagcagtt
atgaaacaagaatcaaaaatatgtaactatattgatatcccacttcagcatatatcagat
cctatattaaaatcaatgcgtcgtggaaccacaaaagccaaaaccactaaattattaaaa
gaatttagagaggctgtaccagaaatggcaattcgtactaccctaattgtaggatatcca
ggagaaacgcaagaagattttgaaactttaaggtcttgggttaaagaaatgcgttttgag
cgtctagggtgttttacatattctcatgaggagaatacccatgcttttaatcttgaagat
gatgttcctgaagatgtgaaaatggaacgagcaaatgagatcatggaaattcaatctcag
atttcttgggaattaaaccaacaaaaaataggtaaggaatttaagataattatagatcgt
aaagaaggtaattattttataggtcgtaccgagtttgattcacccgatgtagataatgaa
gtattaatagatgctactaaacattacctcaagacaggggattataccacagtaaaaatt
tatgaggcagaagattttgacctatatggagaacctatatag
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