Aquimarina sp. ERC-38: NBT05_10135
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Entry
NBT05_10135 CDS
T09583
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aqe
Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqe03009
]
NBT05_10135 (rimO)
Enzymes [BR:
aqe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NBT05_10135 (rimO)
Ribosome biogenesis [BR:
aqe03009
]
Prokaryotic type
ribosomal protein modification factors
NBT05_10135 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UZO79329
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Position
2449522..2450823
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AA seq
433 aa
AA seq
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MRTKSVKKNKINVVTLGCSKNVYDSEVLMGQLKANGKEVAHEEEGNVVVINTCGFIANAK
EESINTILEYVQKKEEGTVDKVYVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLKVLG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHRSTPIQDLVTEAEKLA
AKGVKELILIAQDLTYYGLDLYKERKLAELLKHLVKVEGIEWIRLHYAFPTGFPMEVLEV
MKTEPKICNYLDIPLQHISDKILKSMRRGTTQAKTTALLSKFRATVPEMAIRTTLIVGYP
GETEEDFQVLKEWVKEMRFERLGCFTYSHEEDTHAYHLEDDVPEEVKIDRVNQIMEIQSQ
ISWELNQQHIGRTYRVLIDRKEGSYFIGRTEFDSPDVDNEVLIDATKDYVKTGDFYKVKI
NKAEDFDLYGEVV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaaatcagttaaaaagaacaagattaatgtggtaaccttgggttgtagtaaa
aacgtctacgatagtgaggtgttgatggggcagttaaaagccaatggaaaggaagtggct
catgaagaagaaggaaatgtagtagtaattaatacctgtggttttatagctaatgctaaa
gaagaatctattaataccattttagaatacgttcaaaaaaaagaagaaggcactgttgat
aaagtatatgtcaccggttgtttatccgaacggtacaaaccggatttacaaaaagaaatt
ccggatgttgatcaatacttcggcactaccgaattaccgggtttattaaaagtactgggg
gcggattataaacacgaattaatcggagaacgattaacaactaccccaaaaaattatgcg
tatcttaaaattgctgaaggttgtgaccgaccttgttctttttgtgccattcctttaatg
cgaggtaaacatcgttcaactccaatccaagatttagtcaccgaggcggaaaaacttgct
gcaaaaggagtaaaagaattgatattgatcgctcaggatttgacttactacggattagat
ctttataaagaaagaaagctagccgaacttttaaaacatttggtaaaagtagaaggaatt
gaatggatacgattgcattatgcctttcctaccggatttccgatggaagtattggaagta
atgaaaacggaacccaagatttgtaattatttagatatccctttacagcatatttcagat
aaaattttaaaatccatgcgtaggggaactacccaagctaaaacaacggctttgttatct
aaattcagagcaactgttcctgaaatggctatccgtacgactttaatcgtaggatatccc
ggagaaaccgaagaagattttcaagttttaaaagaatgggtgaaagaaatgcgttttgaa
cgattaggttgttttacctattctcatgaagaagatacacatgcttaccacctggaagac
gatgttcctgaagaagtaaaaatagatcgggttaaccaaattatggaaattcagtctcaa
atctcctgggagttaaatcaacagcatattggaagaacctacagagtgttgatagatcgt
aaagaaggaagctattttataggtagaaccgaattcgactctcccgatgtagataacgaa
gttttgattgatgccacaaaggactacgtaaaaacaggagatttttataaggtgaagatt
aataaagcggaggattttgatctgtatggggaggtggtttaa
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