Aquaspirillum sp. LM1: BXU06_01290
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Entry
BXU06_01290 CDS
T04696
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aql
Aquaspirillum sp. LM1
Pathway
aql03030
DNA replication
aql03410
Base excision repair
aql03420
Nucleotide excision repair
aql03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aql00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BXU06_01290
03410 Base excision repair
BXU06_01290
03420 Nucleotide excision repair
BXU06_01290
03440 Homologous recombination
BXU06_01290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aql03032
]
BXU06_01290
03400 DNA repair and recombination proteins [BR:
aql03400
]
BXU06_01290
Enzymes [BR:
aql01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BXU06_01290
DNA replication proteins [BR:
aql03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BXU06_01290
DNA repair and recombination proteins [BR:
aql03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BXU06_01290
NER (nucleotide excision repair)
GGR (global genome repair) factors
BXU06_01290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
WD40_4
Motif
Other DBs
NCBI-ProteinID:
AQR63852
UniProt:
A0A1U9JIC5
LinkDB
All DBs
Position
complement(283397..286228)
Genome browser
AA seq
943 aa
AA seq
DB search
MKTLLLVDGSSYLYRAFHAMPDLRSPAGDPTGAVYGMVNMLKRLEKDRVFDYSAVVFDAK
GKTFRDDLYPDYKANRPPMPPELAAQVVPVHQAVQALGWPLLMVDGVEADDVIGTLAHQA
AALGWQVVVSTGDKDMAQLVNPLVSLVNTMTSETLDSAGVQEKFGVPPERIIDFLALTGD
KVDNVPGVDGCGPKTAAKWLAEFDTLDGVMTQADSIKGKAGEKLRAAQGHLPLSRQLVTI
KLDVDLQPHLPSGLEALQHGSPRPAELIALYRQCGFRTWLRELDSSASDTASPPAAAPQA
QGSHTDLFADPAPVASAPAQAAPASVAPAHHAETPSAAPDARHYTTLTDLASLQAWIHRL
RAAPVVSFDTETTSLDPLHAKLVGLSFSITPGEAAYLPLMHRDAGGLLPDQLDLATALTE
LKPWLEDPHCKKLGQNLKYDRHVLANHGLTLAGVVDDTLLASYVLESHLTHNMDDLAERH
LGVSTVSYEALCGKGAKQIGFDEVDIATASHYASEDADITLRLAHTFAPQLHGALDDVYR
RIELPTADVLFTMERTGVLIDREELARQSHDIGLRIQGLENRVYELAGQPFNLNSPKQLQ
EILFGKLGISSKGLKKTPTGAISVNEDTLEKLAADHPLPKLLLEYRGLAKLKSTYTDKLP
TMINPDTGRVHTHYSQAVAVTGRLASSEPNLQNIPVRTEEGRRVRKAFIAPPGCQIVSAD
YSQIELRIMAHLSDDPRLLQAFADGEDIHRATAAEVFAVPLAEVNSQQRRYAKTINFGLI
YGMSAFGLAAQLEIERSAAQGFIDRYFARYPGVADYMARTREQASEQGYVETVFGRRLWL
PDIHAANAMKRQGAERAAINAPMQGTAADLIKLAMIAVQGWLDSSGLRSRLIMQVHDELV
LEVPDAELETVKAGVVAAMAQVAELKVPLVADVGSGENWEGAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctgttactggtcgacggttcttcttatctttaccgcgcattccacgccatg
ccggacttgcgctcaccagcgggagaccccaccggcgcggtgtacggcatggtaaacatg
ctgaaaaggctggagaaggatagggtctttgattatagcgccgtcgtttttgatgcaaaa
ggcaagactttccgcgacgatctctaccccgactacaaagccaaccgcccgcccatgccg
ccagagctggccgcccaggtggtgcctgtgcaccaggcggtgcaggcgctgggctggccg
ctgctgatggtggacggcgtagaagccgacgacgtgattggtaccctggcccatcaggct
gccgcgctgggctggcaggtggtggtgtccactggcgacaaggacatggcccaactggtc
aatccgctggtttcgctggtcaacaccatgaccagcgaaaccctggacagcgccggggtg
caagagaaattcggcgtaccgcccgagcgcattattgattttctggcgctcaccggcgac
aaagtggacaacgtgcccggcgtggacggctgcggcccaaaaaccgccgccaaatggctg
gccgaattcgacaccctggatggagtgatgacccaggccgacagcatcaagggcaaggct
ggcgaaaaactgcgcgctgcgcagggccatctgccgctgtcacgccagctggtcaccatc
aagctcgatgtggacctgcagccgcacctgcccagcgggctggaagcgctgcaacatggc
agcccacgcccagccgagctgattgcgctgtaccgccagtgcggctttcgcacctggctg
cgcgaactggacagcagtgccagcgacaccgccagccccccagccgccgccccgcaggcg
caaggcagccacaccgacctgtttgccgaccctgcgcccgtggccagtgcgccagcccag
gcagcgccggccagcgtggccccagcacaccacgccgagacccccagcgccgcgcccgac
gcacgccactacaccaccctcaccgacctggccagcctgcaagcctggatccaccgcctg
cgcgccgcgccagtggtctcgtttgacaccgaaaccaccagcctcgacccactgcacgcc
aagctggtgggcctgagcttcagcatcacccccggcgaagccgcctacctgccgctgatg
caccgcgacgctggcggcctgctgcccgaccagctggacctggccaccgcgctgaccgaa
ctcaaaccctggctggaagacccccactgcaaaaagctcgggcaaaacctcaagtacgac
cgccatgtactggccaaccacggcctgaccctggccggcgtggtggacgacaccctgctg
gcctcctacgtgctggaaagccacctcacccacaatatggacgacctggccgaacgccat
ctgggggtgagcaccgtcagctacgaagccctctgcggcaagggggccaagcagattggc
tttgacgaagtggacatcgccaccgccagccattacgccagcgaagacgccgacatcacc
ctgcgcctggcgcacacctttgccccgcaactgcacggcgcgctggacgacgtataccgc
cgcatcgaactgcccaccgccgacgtgctattcaccatggagcgcaccggcgtgctgatc
gaccgcgaggaactggcccggcaaagccacgacatcggcctgcgcatccaggggctggaa
aaccgggtatacgaactggccggccagccgtttaacctgaactcacccaagcagttgcag
gaaatcctgttcggcaaactgggcatcagcagcaaaggcctgaaaaaaaccccgacaggg
gcgatttcggtcaacgaagacaccctggaaaaactcgccgccgaccacccgctgcccaag
ctgctgctggaatatcgcggcctggccaagctgaaatccacctacaccgacaaactgccc
accatgatcaacccggataccgggcgggtacacacccattactcgcaagcggtggcggtg
accgggcggctggccagcagcgaacccaatctgcagaacatcccggtgcgcaccgaagaa
ggtcgccgcgtgcgcaaggcctttatcgccccgcccggctgccagattgtgtcggcggat
tactcgcagatcgaactgcgcatcatggcgcacctgtccgacgacccgcgcctgctgcaa
gcctttgccgacggtgaagacatccaccgcgccaccgccgccgaagtgtttgccgtgccg
ctggccgaagtgaacagccagcagcgccgctacgccaaaaccatcaactttggcctgatc
tacggcatgagcgccttcggcctggccgcccagctggaaatcgaacgcagcgccgcccag
ggctttatcgaccgctactttgcccgctaccccggcgtggctgactacatggcgcgcacc
cgcgaacaggcgagcgagcaaggctatgtggaaaccgtgtttggccgccgcctgtggctg
cccgacatccatgccgccaacgccatgaaacgccaaggggctgagcgcgccgccatcaac
gcaccgatgcaaggcaccgccgccgacctgatcaaactggcgatgattgccgtgcaaggc
tggctggacagcagcggcctgcgcagccggctaatcatgcaggtacacgatgaactggtg
ctggaagtgccggatgccgagctggaaaccgtgaaagccggcgtagtggcagccatggcg
caggtggccgaattgaaagtgccgctggtggcggacgtgggcagcggggagaactgggag
ggggcgcattga
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