Ascochyta rabiei: EKO05_0000535
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Entry
EKO05_0000535 CDS
T09445
Name
(RefSeq) DNA-directed RNA polymerase
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
arab
Ascochyta rabiei
Pathway
arab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EKO05_0000535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0000535
Enzymes [BR:
arab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EKO05_0000535
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
EKO05_0000535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Rpr2
Motif
Other DBs
NCBI-GeneID:
62210076
NCBI-ProteinID:
XP_038803078
LinkDB
All DBs
Position
1:complement(join(1837985..1839461,1839516..1841197,1841263..1841742))
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AA seq
1212 aa
AA seq
DB search
MAPAAAKKQPQWSTDFDTKRRQHLFRNPPKDKTAYPTLAAAVDPHINSFNAIFAPGGQIE
EGIKDIGIKSFTDGDPYAQPENIGRRNRLSVRIQDVFLDKAVLPPSNKVALKNRNILPAE
CRERHATYRGKLRARLEYRVNNEDWQEEVCDLGTVPIMLRSNRCHLQNMSPDQLVKAKEE
TEELGGYFIVNGIEKIIRMLQVNRRNYPMAIKRGAFTNRGPGYTPYGIQIRSIRTDQSSQ
TNALHYLSDGNVNFRFSWRKAEYLVPVMMVMKALVETNDRDIFEGIVGAAGSKGLAEKQF
VTDRVELLLRTYKVYGLHSQAKTRAYLGSKFKVVLQLPDDASDDEAGVEFLRRIVLPHLG
AYNVTPAQNADKFQMILFMIRKLYSLVEGECAVDNPDAVQNQEILLGGQLYGMVIKERLD
EWLNSIRPVLQDWGRRSEWKSFTSPEFKKEFVPRVLKRTTMDVGRAMEYFLSTGNLVSPT
GLDLQQTAGFVVVAEKINFYRFISHFRMVHRGAFFAQLKTTTVRKLLPESWGFMCPVHTP
DGSPCGLLNHFAHKCKLATQNVDVSAVPKLVAQLGVSSKSSASLESSVVVQLDGRVLGFC
SPKQAKIIADTLRYWKVEGTHDVPLELEIGYVPNSNGGQYPGIFMFSQVARMYRPVKYLP
LGKLDYVGPFEQPYMSIACTDPEIVSGDSTHVEFDPTNIFSIIANMTPFSDFNQSPRNMY
QCQMGKQSMGTPGTALRYRTDNKTYRLQTGQTPIVRPPLHNEYGFDNFPNGTNAVVAVIS
YTGYDMDDAMILNKSAHERGFGHGTIYKTKICDLEEGGRRNRSGKTVSKLFGFAPEGLKK
ASYLDTLDDDGFPRVGTLLRNGDVIAAWHTVSYDAATDDYINRDANTQFFKYKEDELAFV
EEVRIIGSEDGTQPCQKISVKLRVPRSPIIGDKFSSRHGQKGVCSQKWPSIDMPFSESGI
QPDVIINPHAFPSRMTIGMFVESLAGKAGAMHGIAQDSTPFRFDEQNTAVDFFGHQLMKA
GYNYYGNEPMYSGITGQELAADIYIGVVYYQRLRHMVNDKYQVRTTGPVNSTTGQPIKGR
KKGGGIRVGEMERDALIAHGTAFLLQDRLMNCSDYTKAAICRGCGSFLSTAPTVSEYSRK
KDAGGKNMTVRCRRCARLADGHQSKSDTWTDGQGMRFSGGDDIATVAIPGVLKYLDVELA
SMGVRLKFNVAP
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgctgccgcgaaaaagcagccacagtggtcgactgactttgacaccaagcgc
cgccaacacctcttccggaacccgcccaaggacaagaccgcctatccgacacttgctgca
gccgttgacccccacattaactcgttcaacgcaatctttgcgcccggcggccagatagag
gagggcatcaaggacattggcatcaagagtttcaccgacggcgacccgtatgcacagccc
gagaacattgggcgcaggaacaggctttctgtgcgcattcaggatgtcttcctcgacaag
gctgtcctgccgccctcgaacaaggtcgccctcaagaaccgcaacatcctgcccgccgag
tgtcgagagcgccacgccacgtaccgtggcaagcttcgtgctcgcctggagtacagggtg
aacaacgaggattggcaggaggaagtctgcgatctgggcacagtacccatcatgctgagg
tccaaccggtgtcacctccagaacatgagccctgatcagcttgtcaaggccaaggaagag
accgaggagctgggaggctactttatcgtcaacggtatcgagaagattatccgcatgctg
caggtcaacaggcgcaactaccccatggccatcaagcgtggtgctttcacgaaccgtggc
cccggctacacaccgtacggtatccagattcgctcgatacgcaccgaccagtcttcgcag
acgaacgccctccactacctgagcgacggaaacgtcaacttccgattttcatggaggaag
gcggaatacctggtccctgtcatgatggtcatgaaggcgttggtggaaacaaacgaccgc
gacatctttgagggcatcgttggagcagccggctcaaaggggcttgcggagaagcagttc
gtcacggatagagtggaattgctactccgaacgtacaaggtctatgggttacactcccaa
gccaagacaagggcctacctgggttccaagttcaaggtcgtactgcagcttccagatgac
gccagcgacgacgaagcaggtgtcgagtttttacgaaggattgtcctgcctcacctcgga
gcctacaatgttactccagcgcagaacgccgacaaattccagatgatcctctttatgatc
cggaaattgtactcattggttgagggcgaatgcgcggtcgacaatcctgatgccgttcaa
aaccaagaaatcctgcttggaggacagctttacggaatggtcatcaaggaaagattagac
gagtggctgaactcgattcgacctgtcttgcaggactggggtcgtcggtcagagtggaag
tcattcacgtcgcccgagttcaagaaggagtttgttccaagggttcttaagagaacaacc
atggatgtcggacgcgccatggagtacttcctctccactggtaaccttgtcagtcctacc
ggtcttgatctgcagcaaacggccggatttgtcgttgtggctgagaagatcaatttctac
cgtttcatcagccattttaggatggtgcacagaggtgctttctttgctcagctcaaaacc
accaccgtgcgaaagctattaccagagagctggggcttcatgtgcccggtccacacacct
gacggttctccatgtggtttgctcaaccactttgcgcacaagtgcaagttggctacacag
aacgttgatgtttcagccgttcctaagcttgtggcgcagctaggcgtatcaagcaaatcc
tccgcgtcacttgagtcaagtgtcgtcgtacagcttgacggccgcgtcttgggcttctgc
tcaccgaagcaggccaagattattgcagatacattgcgatactggaaggttgaagggaca
catgacgtgccgttggagctcgagattggatacgttcccaattccaacggcggtcagtac
cccggtattttcatgttctcgcaggttgcacgcatgtaccgacctgtcaagtacctgcct
cttggcaagctggactacgttggacctttcgaacagccgtacatgtcaatcgcgtgtaca
gaccctgagattgtgtctggcgactccacgcacgttgagttcgaccctactaacatcttc
tcgatcattgccaacatgacacccttctctgacttcaatcagtcgccgcgaaacatgtac
cagtgtcagatgggtaagcaatcaatgggaacacctggaacagccctgcgataccgaaca
gacaacaagacctaccgcctgcagacaggtcaaacgccaatcgtacgaccacccctgcac
aacgagtatggattcgacaacttccccaacggcaccaacgccgtcgtggctgttatttct
tacacgggttacgacatggacgatgctatgattctgaacaaatctgctcacgagcgcggt
ttcggtcacggtactatctacaagacaaagatctgcgatcttgaggagggtggacgcagg
aataggtctggaaagactgtatcaaaactgtttggctttgctccagaaggactcaagaag
gcgtcttacctcgacaccctagatgatgacggcttcccacgtgttggaacgttacttcgt
aatggcgatgtcatcgcagcgtggcacacggtctcgtacgacgctgctaccgatgactac
atcaaccgcgatgccaacacccagttcttcaagtacaaagaggacgaacttgcttttgtg
gaagaagtccgcatcatcggctcagaggatggcacacagccatgccagaagatcagcgtc
aagcttcgcgtaccgcgttcgcctatcatcggtgacaagttctcctcgcgtcacggacaa
aagggtgtttgttcacaaaaatggccgtcaatcgacatgcccttctccgagtctggtatt
cagcccgatgtcatcatcaacccccacgctttcccctctcgaatgacaatcggtatgttc
gtcgagtctctggctggaaaagctggcgcgatgcacggcatcgctcaagattcaacacct
ttccgcttcgatgagcaaaacaccgccgttgacttcttcggccaccagcttatgaaggcg
ggctacaactactatggcaacgagcccatgtacagcggtatcacgggtcaggaactcgct
gctgacatctacattggcgttgtttactaccagcgtctccgtcacatggtcaacgataaa
taccaggtccgtaccacaggtccagtgaactcgaccactggccagcccatcaagggaagg
aagaagggtggcggcatccgtgtcggtgaaatggagcgcgatgcactcattgcccacggc
acagctttccttctccaggatcgtctgatgaactgctccgactacacaaaggcagccatc
tgccgcggctgtggcagcttcttgtccaccgcaccgacagtgagcgagtactcgcgcaag
aaggacgccggtggtaagaacatgaccgtcaggtgcaggcggtgcgctaggctagccgac
gggcaccagagcaagagcgacacctggacagacgggcagggcatgaggttcagcggcggc
gacgatattgccacggtcgccatcccaggcgttctgaagtatctggatgtcgagctcgcc
agcatgggcgtcaggctcaagttcaacgttgcgccctag
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