Amycolatopsis rhabdoformis: VSH64_14735
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Entry
VSH64_14735 CDS
T09694
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00052
Galactose metabolism
arhd00511
Other glycan degradation
arhd00600
Sphingolipid metabolism
arhd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
VSH64_14735
09103 Lipid metabolism
00600 Sphingolipid metabolism
VSH64_14735
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
VSH64_14735
Enzymes [BR:
arhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
VSH64_14735
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Glyco_hydro2_C5
Glyco_hydro_2
Invasin_D3
DUF5944
Big_1
Motif
Other DBs
NCBI-ProteinID:
WSE33356
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All DBs
Position
3264043..3266448
Genome browser
AA seq
801 aa
AA seq
DB search
MAAEEPGSPAAPKTGHARRTFLFGAGAVIAASGAISAALTHPAPVEATGGFGADWQFGPF
VPGCTDVDFDDRAMPLVSVPHCVTPLSWQGWHPDDWQHLWVYRQHFLVPPQLRKNRAFLR
FDGVLSATTVFLNGRRVASQSGGYLPLTCEVTGMLTDKDNVLAVAVDGRWQQDTPPDLPE
YPNPTAIDFYQPAGIYRAVNLYGTPQAYLSDVYAQQIAVLTPSRAVVVHCTVDAAKAVKG
PVRLTATLSQAGTEIASAVTDITGLRKGETNTTVTLEGLEAVKLWDVDDPAMCDVVVTLS
VGGRKVHTYPVRTGLRDAQFTVDGFRLNGRPLKLFGLNRHQWYPFVGGAMPERVQRRDAE
ILKNELNVNMVRCSHYPQSPAFLDACDELGILVWEELPGWDHVGDTAWQELAVRDVHDMI
VRDRNHPSIIVWGTRVNETLGQYTLYGKTDQLAAELDPMRPCTGAVAGQKGYVQPLYPVK
ENGGVFSFNDYSRPPSRNAPPPLRPPRHGVPYLVSEAVGTLVGAPYFRRTDSADVQREQS
MLHAWVHEHAAADPRYCGLIAWCGFDYPSGWYHSLRGVKYPGVVDFFRIPKLGAGFYRAQ
RSPSRGAVIEPAFYWDFGPGSPRGGPGRNALIWSNCDQLVVTVAGRRPVTVLPDHARFGH
LKHPPFLVNLTVTGQARPDLTIEGRVKGQTVLRRRFSADPTFDTLAVAADDGAITADGQD
TTRVTLRSVDRYGAPRPHAHGVLSVAVDGPGILIGDPFLDFGALGGAAAVWIRSMRDTPG
TITVTASHPFLDTGTATISAV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaagaacccggaagccctgcggctccgaagaccggtcacgcgcggcgcacg
ttcctgttcggcgcgggcgcggtcatcgccgcgtccggcgcgatctcggccgcgctgacg
catcccgcgccggtcgaggcgacgggcggattcggcgccgactggcagttcggcccgttc
gtgccgggctgcaccgacgtcgacttcgacgaccgcgcgatgccgctcgtgtcggtgccc
cactgcgtcacgccgctttcgtggcagggctggcaccccgacgactggcagcacctctgg
gtgtaccgccagcacttcctggtgccgccgcagctgcgcaagaaccgcgcgttcctgcgg
ttcgacggggtgctcagcgccaccacggtgttcctcaacggccgccgggtcgcgtcgcag
agcggcgggtacctgccgctcacgtgcgaggtcaccgggatgctcaccgacaaggacaac
gtgctggccgtggcggtcgacggccggtggcagcaggacactccgccggacctgccggag
tacccgaaccccacggccatcgacttctaccagcccgccggcatctaccgcgcggtgaac
ctctacggcaccccgcaggcctacctgtccgatgtgtacgcccagcagatcgccgtgctc
acacccagccgggccgtggtggtgcactgcaccgtcgacgcggcgaaagcggtgaagggc
ccggtgcggctcacggcgacgctgagccaggccggcaccgagatcgcctccgccgtcacc
gacatcaccgggctgcgcaagggcgagacgaacaccaccgtcacgctcgagggcctcgaa
gcggtgaagctgtgggacgtcgacgatccggcgatgtgcgacgtcgtggtcacgctctcg
gtgggcgggcgcaaggtccacacctacccggtgcgcaccggcctgcgcgacgcgcagttc
actgtggacggtttccggctcaacggccggcccctcaagctcttcgggctcaaccgccac
cagtggtacccgttcgtgggcggcgcgatgcccgagcgggtgcagcggcgcgacgccgag
atcctcaagaacgagctcaacgtcaacatggtgcgctgctcgcactacccgcagtcgccc
gcgttcctcgacgcgtgcgacgagctcggcatcctcgtgtgggaggagctgccgggctgg
gaccacgtgggcgacaccgcgtggcaggagctcgcggtgcgcgacgtgcacgacatgatc
gtgcgcgatcgcaaccacccgtcgatcatcgtgtggggcacccgcgtgaacgagacgctg
ggccagtacacgctctacggcaagaccgaccagctggccgcggagctggacccgatgcgg
ccgtgcaccggcgcggtcgccgggcagaagggctacgtccagccgctgtacccggtgaag
gagaacggcggggtgttctccttcaacgactacagccggccgccttcgcgcaacgcgccg
ccgccgctgcgcccgccgcgccacggcgtgccctacctggtgagcgaagccgtgggcaca
ctggtgggcgcgccgtacttccgccgcaccgactcggccgacgtgcagcgcgagcagagc
atgctgcacgcctgggtgcacgaacacgcggcggccgacccgcgctactgcggcctgatc
gcgtggtgcggcttcgactacccgtcgggctggtaccactcgctgcgcggggtgaagtac
cccggtgtcgtcgacttcttccggattcccaagctgggcgcgggtttctaccgcgctcaa
cggtcgccttcgcgcggcgcggtgatcgagcccgcgttctactgggacttcgggcccggc
tcaccccgcggcgggcccgggcgcaacgcgctgatctggtccaactgcgaccagctcgtg
gtcaccgtggcgggccggcggccggtcacggtgctgcccgaccacgcgcggttcgggcac
ttgaaacacccgccgttcctggtgaacctcacggtcaccggccaggcccgccccgatctc
acgatcgagggccgcgtgaaggggcagacggtgctgcgccgccggttcagcgccgatccg
acgttcgacacgctcgccgtggccgccgacgacggcgccatcaccgccgacggccaggac
accacgcgcgtcacgctccgctcggtcgaccgctacggcgccccgcgcccgcacgcccac
ggcgtgctcagcgtcgcggtcgacggcccgggaatcctgatcggcgacccgttcctggac
ttcggcgcgctcggcggcgcggcggcggtgtggatccgctcgatgcgcgacacgcccggc
acgatcaccgtgaccgcgtcgcatccgttcctggacacgggaacggccacgatctcggcg
gtctga
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