Amycolatopsis rhabdoformis: VSH64_23000
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Entry
VSH64_23000 CDS
T09694
Name
(GenBank) class III extradiol dioxygenase subunit beta
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00362
Benzoate degradation
arhd00624
Polycyclic aromatic hydrocarbon degradation
arhd00627
Aminobenzoate degradation
arhd01100
Metabolic pathways
arhd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VSH64_23000
00627 Aminobenzoate degradation
VSH64_23000
00624 Polycyclic aromatic hydrocarbon degradation
VSH64_23000
Enzymes [BR:
arhd01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
VSH64_23000
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
WSE34912
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All DBs
Position
5030563..5031411
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AA seq
282 aa
AA seq
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MARVTWGLATSHVPSIGAAMDHGKTADPYWKPLFDGYAPAREWMAARRPDVAVIVYNDHA
NALDLDLVPTFAIGTAQRYEVADEGWGRRPVPPVVGSPELSEHLVRSLVDDSFDIATFHR
LDVDHGLTVPLSVYCPDPGDAWPCAVVPVLVNVIQYPQPTAARCYALGQAIGRAIRSFPP
DLDVAVFGTGGMSHQLAGARAGLINTPFDRKFLAQIETDPSALAALTREEYIAAAGTEGV
ELIMWLVMRGALDARITRIHETYHVPASNTAAALALFENGVS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttggctagggtgacctgggggctggccacttcgcacgtgccgtcgatcggtgctgcgatg
gaccacggcaaaaccgccgacccgtactggaaaccgctgttcgacggctacgcgccggcg
cgcgagtggatggccgcgcgccggccggacgtcgcggtgatcgtgtacaacgaccacgcc
aacgcgctcgacctcgacctggtgccgacgttcgcgatcggcaccgcgcagcgctacgag
gtggccgacgagggctggggccgccggcccgtgccgccggtggtgggctcgccggagctg
agcgagcacctggtgcgcagcctcgtggacgactcgttcgacatcgcgaccttccaccgg
ctcgacgtggaccacgggctcaccgtgccgctgtcggtgtactgcccggacccgggtgac
gcgtggccgtgcgcggtggtgccggtgctcgtgaacgtgatccagtacccgcagcccacc
gccgcccggtgttacgcactgggtcaggcgatcggccgcgcgatccgctcgttcccgccc
gacctcgacgtcgccgtgttcggcaccggcggcatgtcccaccagctcgccggggcgcgc
gcggggctgatcaacacaccgttcgaccgcaagttcctggcgcagatcgaaaccgacccg
tcggcgctcgccgcgctcacgcgtgaggagtacatcgccgcggccggcacggaaggcgtc
gagctgatcatgtggctggtgatgcgcggcgcgctggacgcgcggatcacgcgcatccac
gagacctaccacgtgccggcgtcgaataccgcggccgcgctggcgctcttcgagaacgga
gtctcatga
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