Amycolatopsis rhabdoformis: VSH64_40045
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Entry
VSH64_40045 CDS
T09694
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00860
Porphyrin metabolism
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01120
Microbial metabolism in diverse environments
arhd01240
Biosynthesis of cofactors
Module
arhd_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
arhd_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VSH64_40045 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arhd04147
]
VSH64_40045 (hemB)
Enzymes [BR:
arhd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
VSH64_40045 (hemB)
Exosome [BR:
arhd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VSH64_40045 (hemB)
BRITE hierarchy
Motif
Pfam:
ALAD
SH3_6
Motif
Other DBs
NCBI-ProteinID:
WSE28954
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All DBs
Position
8633333..8634304
Genome browser
AA seq
323 aa
AA seq
DB search
MFPEHRPRRLRTTPAMRRLVGETTLRPRQLILPMFVAEGIDAPRPIQSMPGVVQHTRDTL
RKAAVDAVNAGVGGLMLFGIPETRDAEGSGAVDENGILNVALRDLRQELGDATVLMADTC
LDEFTDHGHCGVLDADGAVDNDATLRIYAEMAVAQAEAGAHVLGPSGMMDGQVGVIRRAL
DEVGHNDKAILAYSAKYASAFYGPFREAVDSQLKGDRKTYQQDLGNAREALREIELDLGE
GADMIMVKPALSYLDVIKAAADISPVPVAAYNISGEYAMVEAAAANGWLERERTILEVLT
SIRRAGADLILTYWATEAAAWLD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgttccccgagcatcgaccccgcaggctccgtaccacgccggccatgcgcaggctggtc
ggtgaaacgacgcttcgcccgcgtcagctgattctgcccatgttcgtggcggaggggatc
gacgcgccgcggccgatccagagcatgccgggggttgtgcagcacacccgggacacgctg
cggaaggccgcggtcgacgcggtgaacgccggcgtgggtgggctgatgctgttcggcatt
ccggagacgcgtgacgccgagggctcgggtgccgtcgacgagaacgggatcctgaacgtc
gcgctgcgggatctgcggcaggaactcggtgacgcgaccgtgctgatggccgacacgtgc
ctcgacgagttcaccgatcacggccactgcggcgtgctcgacgccgacggcgcggtggac
aacgacgcgaccctgcgcatctacgcggaaatggccgtggcgcaggcggaagcgggtgcg
cacgtgctcgggccgagcggcatgatggacggccaggtcggcgtgatccgccgggcgctc
gacgaggtcggccacaacgacaaggccatcctggcgtactcggcgaagtacgccagcgcg
ttctacggtccgttccgcgaagctgtcgactcgcagctcaagggcgaccgcaagacctac
cagcaggacctgggcaacgcgcgcgaagcgttgcgcgagatcgagctggatctcggcgag
ggcgccgacatgatcatggtcaagccagcactgtcctatttggacgtcatcaaggcggcg
gcggacatctcgccggtgccggtggccgcctacaacatctcgggtgagtacgcgatggtc
gaggccgccgcggccaacggctggctcgagcgcgagcgcacgatcctcgaagtgctcacg
tcgatccgccgcgcgggcgccgacctgatcctcacgtactgggccaccgaagccgccgcc
tggctcgactga
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