Amycolatopsis rhabdoformis: VSH64_46710
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Entry
VSH64_46710 CDS
T09694
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00190
Oxidative phosphorylation
arhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
VSH64_46710
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VSH64_46710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arhd03019
]
VSH64_46710
Enzymes [BR:
arhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
VSH64_46710
Messenger RNA biogenesis [BR:
arhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VSH64_46710
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WSE30204
LinkDB
All DBs
Position
complement(10035521..10038007)
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AA seq
828 aa
AA seq
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MGIVSTDDASTSGQPARRRRASAAKADGPASAARHTSAARKATPKSGASADAVKTAARGT
AAKAGSNAAGKAKAAKGEPAGTGTAAKSPRTRKTTAATAVAAPETARPTRRTTAAVDAGA
SGEDFRAVPSAPPAVTANAPTAVESLPDDRYFNRELSWLDFNARVLALAEDASQPLLERT
KFLAIFASNLDEFYMVRVAGLKRRDDTGLSVRSADGLTPREQLDYIAKRNQDLVERHTSA
WEDRLRPELAQQDIQLVGWADLAGADQLRLSSYFSEQIFPVLTPLAVDPAHPFPYISGLS
LNLAVTVRDPQGGTERFARVKVPSNVPRLMRVETERTSRTATFLPLEELIAAHLGELFTG
MEVTEHHVFRVTRNADFEVEEDRDEDLLQALERELAQRRFGPPVRLEVAEDMSEHMLELL
LRELEVDPADVVEVPGLLDLTCLHQLSGVDRKELKDRSFVPATHPAFGERETPKSVFATL
REGDVLVHHPYDSFSTSVQRFIEQAAADSKVLAIKQTLYRTSGDSPIVDALIDAAEAGKQ
VVALVEIKARFDEQANITWARTLERAGVHVVYGLVGLKTHCKVSMVVRQEGSTIRRYCHI
GTGNYNPKTARLYEDLGLLTADPSIGADVTDLFNVLTGYSRQDTYRTILTSPHGIRRGIV
RAIGEEIELARAGQVAGIRIKCNSLVDEQVIDALYHASQAGVPVDVVVRGICALKPGVEG
LSENIQVRSILGRFLEHSRVFHFRAGGTHWIGSADMMHRNLDRRIEALVRVKDPKLTNQL
DAVLDSALDPTTRCWVLTASGEWQPFPAAGSQVRDHQVELAKLHGAAG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgtgagcacagacgacgccagcacatcgggacagcccgctcggcggcgcagg
gccagcgcggcgaaagctgacgggcccgcgagcgccgcccggcacaccagcgcggcgagg
aaggcgacgcccaagagcggcgcctccgccgacgcggtgaaaacggccgcgcgcggcacc
gccgccaaggccgggagcaacgcggccggcaaggccaaggccgccaagggcgagccggcc
ggaaccggaacggcggcgaagagcccgcggacccgcaagaccaccgcggccaccgccgtg
gccgccccggagaccgcgcgacccacccgccgcaccaccgccgcggtcgacgcgggtgcc
tccggcgaagacttccgcgctgtgccctcggctcccccggccgtcacggcgaacgctccg
acggccgtggagtcgcttcccgacgaccggtatttcaaccgtgagctgtcctggctcgac
ttcaacgcgcgggtgctggcgctcgccgaggacgcgtcgcagccgctgctcgagcgcacg
aagttcctggccatcttcgcgtccaatttggacgagttctacatggtgcgcgtggccggg
ctgaagcgccgcgacgacacgggcctgtccgtgcgcagcgccgacggcctcacgccgcgc
gagcagctggactacatcgccaagcgcaaccaggacctggtggagcgccacacgagcgcg
tgggaagaccggctgcgcccggagctggcccagcaggacatccagctcgtgggctgggcc
gacctcgccggtgcggaccagctgcggctctcgagctacttctcggagcagatcttcccg
gtgctcacgccgttggcggtcgacccggcgcacccgttcccgtacatctcgggcctgtcg
ctcaacctcgcggtcacggttcgcgacccgcagggcggcaccgagcgcttcgcccgcgtg
aaggtgccgagcaacgtgccgcgcctgatgcgcgtggaaaccgaacgcaccagccgcacg
gccacgttcctgccgctggaggaactcatcgccgcgcacctgggcgagctgttcaccggc
atggaggtgaccgagcaccacgtgttccgtgtcacccgcaacgccgatttcgaggtcgag
gaagaccgcgacgaagacctgctgcaggcgttggagcgcgagctggcgcagcgccgcttc
gggccgccggtgcggctcgaggtcgccgaggacatgagcgagcacatgctcgagctgctg
ctgcgtgagctcgaggtggacccggccgacgtcgtcgaggtgccggggctgctcgacctg
acctgtctgcaccagctgtccggtgtggaccgcaaggagctcaaggaccggtcgttcgtg
ccggccacgcacccggcgttcggcgaacgcgagacgcccaagagcgtgttcgcgacgctg
cgcgagggcgacgtgctggtgcaccacccgtacgactcgttctccacgagcgtgcagcgc
ttcatcgagcaggccgcggccgactcgaaggtgctggcgatcaagcagacgctctaccgc
acctcgggcgactcgccgatcgtcgacgcgctgatcgacgccgccgaggccggcaagcag
gtcgtggcgctggtcgagatcaaggcgcgcttcgacgagcaggccaacatcacgtgggcg
cgcacgctggagcgcgcgggcgtgcacgtggtctacggcctcgtcgggctgaagacgcac
tgcaaggtgtcgatggtggtgcgccaggagggttcgaccatccgccgctactgccacatc
ggcaccggcaactacaacccgaagaccgcgcgtctgtacgaggacctcggcctgctcacg
gccgacccgagcatcggcgccgacgtcaccgacctgttcaacgtgctcacgggctactcg
cgccaggacacctaccgcacgatcctcacgtcgccccacggcatccgccgcggcatcgtg
cgcgcgatcggcgaggagatcgagctggcgcgcgccgggcaggtcgcggggatccggatc
aagtgcaactcgctcgtcgacgagcaggtgatcgacgcgctgtaccacgcttcgcaggcc
ggggtgcccgtcgacgtggtggtgcgcgggatctgcgcgctgaagccgggtgtcgagggg
ctgtcggagaacatccaggtgcgctcgatcctgggccggttcctggagcactcgcgggtg
ttccacttccgcgcgggcggcacgcactggatcggcagcgccgacatgatgcaccgcaac
ctcgaccgccggatcgaggcgctcgtgcgcgtgaaggacccgaagctcacgaaccagctc
gacgccgtgctcgactcggcgctcgacccgaccacgcgctgctgggtgctcacggccagc
ggcgagtggcagccgttccccgccgccggttcacaggtgcgtgatcaccaggtggagctc
gcgaagctgcacggggccgccggatga
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