Athalia rosae (coleseed sawfly): 105686850
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Entry
105686850 CDS
T09776
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105686850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroa03021
]
105686850
Enzymes [BR:
aroa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105686850
Transcription machinery [BR:
aroa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105686850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Glutaminase
Motif
Other DBs
NCBI-GeneID:
105686850
NCBI-ProteinID:
XP_012257577
EnsemblRapid:
ENSAEAG00005010502
LinkDB
All DBs
Position
7:5650834..5663890
Genome browser
AA seq
1688 aa
AA seq
DB search
MQRQSKPNIRMSVKHHDPQNLTFSMFTAEDIRNLSVTKISTPLSFNVLGHPLKGGLYDPA
LGPLSDRSDPCGTCGGNIVRCSGHFGHIELPVPVVNPLFHKQLWTLIRLSCLSCFKLQIS
SRMKLLLVAKIKLLEEGCIAELEELTQEIQHIISSMNEEEGAEEFVRETIDAFMENMHNR
QRFNHNVQLASQEDNATTKNTNIQRFVYIDNTLKQFRAGNLCLYCQCAIPKVKSFRNKIM
TTKSANLETSESIIQRGVVRRLNTVLIMPDQSQEYLRQLWLNEADLLRVIMPCLNSTKIE
HPTDIMFLKAVAVLPPLVRPVNYLQGQMIEHPQSQVYKSIIQDCLVLRNIIQTIQDGNTS
QLPEEGRLVFDQIRGNSAVEKLHNAWEQLQTNVDHVMDRDMNKTTQSASCQGLKQVIEKK
EGIIRMHMMGKRVNFAARSVITPDPNLSIDEIGIPEAFALKLTYPVPVTPWNVAELRKMI
LNGPNVHPGAVMVENEDGSVKRLCATGFVAREAIAKRLLTTSVKAGSFFRGTKIVHRHLQ
NGDVLLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNEL
ARSEGYNIANVSNQYLVPKDGTPLSGLIQDHMVSGVRLTLRGKFFSREDYMQLVYSALTD
VQGDLILLPPAIIKPKLLWSGKQILSTVIINATPRGRAKINLTASAKIGPKAWETRKPRR
WKCGTEFDDPKTMSEAEVIIRNGELLCGVLDKIHYGATPYGLIHCVYELYGGAHSSKLLS
AFGKLFQSHLQREGFTLGIEDILILPNAGDKRTKFIKECRTIGESTQKAALEVPDDTPIE
EVKAQLQKSYLRNPKFQAIVDRKYKTALDVFTNDINKTCLPAGLFKKFPDNNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGKRPPLMISGKSLPAFAPYDPTPRAGGFIDGRFMTGIQP
QEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLTVSYDSTVRDSDGSLIQLNYGE
DGLDVPSSQFLKKEQLDFLVDNKNAILEPELLNGLRDLSTQKILKIGRKIQKWVKKHGSP
LQKRRTSEFVEFCTEHSGSDVLKHSKIIESCGRSKGALILMKKWIKSDEETKLKYKDKCT
HCPDPLFSRHTQDSNYGVLTERVEGLINDYLSSKRSPIDKDQLRDILSLKVMKSLCQPGE
PVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASQNIKTPSMEIPFK
SQLPKLEKRADKLRLKLTRCTLANVLTNVNVDGCLELWPQRRMVYTLTMQFLRRKSYKRE
YSVQPIYVLTKTENSFFRDVFREIKKSAKASGALLHVEEDKKPVDDDQLDANESEISDAN
RRRGRLDLGETHESSDEDEPAEDADATTARSIARHQENQEYEDPEEASDESDDEIEDDDD
DEAAEAQNEEKQEKDEDEADDLDVANRRKKVIDMYPNAIDYEFDKKKYLSCKLKFWLPLR
MAKLDLSRILRTVAEKVVLWETPLIRRAFTFQNASDETILKTDGLNIVEMFKYNEILELN
RLYSNDIYGISQTYGIEAANRVIVKEVKDVFKMYGITVDPRHLLLIADYMTFDGTFQPLS
RKGMENSASPLQQISFESSLTFMKNAAVQNKKDDLSSPSSRLMLGQPCKSGTGLFTLMNR
MDAELTAQ
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcaatcaaagccgaatattcggatgtctgtaaaacatcatgacccccagaac
ctaacattttcaatgttcaccgctgaagacatacgcaatttaagcgtcaccaagataagt
acgccgctctcattcaatgttttgggccatccgctgaaaggtggactgtacgacccagct
ttaggaccgctgagcgacagatcagatccttgtggaacctgtggcggcaatattgtaaga
tgttcagggcactttgggcacatagaactgccggtgccggtagtgaatccgctatttcac
aaacagctttggaccttaattaggctctcttgcttgtcatgtttcaaacttcaaatatca
agtcgtatgaagttacttttagtggctaaaataaaactcttggaagagggatgcattgcc
gaattagaggaactaacacaagaaatccagcacatcatatcttcaatgaacgaagaggag
ggtgccgaagaattcgtcagagaaacaatcgatgcttttatggagaatatgcacaatcgc
caaagattcaatcacaatgtgcagcttgcttctcaagaagataatgctactacaaagaat
acaaacattcagagattcgtctacatcgacaacacactcaagcaatttcgtgcgggtaat
ctttgcttatactgccagtgtgcaattcccaaagttaaatcattcagaaataaaataatg
accaccaaatcagcaaacctcgagacaagcgaaagtattatccagcgaggtgtcgttcga
cgattaaatacagttctgatcatgcccgaccaatctcaagaatacttgcgtcaattgtgg
ttaaacgaagcagatttattgagggtaataatgccctgcttgaattcgactaaaatagag
catccgacagacatcatgtttctcaaggccgtagctgtacttccaccccttgtacggcca
gtgaattaccttcagggtcaaatgatcgagcatcctcagtcccaagtatacaagagcatc
atacaagactgtcttgtgctcagaaatatcatacaaactatacaagacggaaacacttcc
caacttcctgaggaaggcaggcttgttttcgaccaaatcagagggaactcggcggtggaa
aaacttcacaatgcttgggagcagctccaaacaaacgtggatcatgtgatggatcgagat
atgaacaagacaacccaatctgcaagttgtcaaggtctaaaacaggtgatcgaaaagaaa
gagggtattattcgcatgcacatgatgggaaagagagtaaattttgcagccagatccgtc
atcacgccagatcccaatttgagtatcgatgaaataggtatcccggaagcgtttgccttg
aaactgacttacccagttccagtcacaccatggaatgttgctgaattacgaaaaatgata
cttaatggaccaaacgttcatccaggggcggtcatggtagaaaatgaagacggttcagtg
aaacgtctctgtgcgacaggatttgtcgcacgagaagcaattgcaaagcgtttgttgacg
acaagcgttaaggcaggaagttttttccgtggaacgaaaattgtacatcgtcatttgcag
aatggtgacgtactacttttgaatcgtcagccaactctacataaaccgagtatcatggct
cataaagccagaatactcaagggtgaaaaaacgttgcgtcttcattatgcaaactgcaag
gcgtacaacgctgactttgacggagatgaaatgaacgctcactttccccagaacgaactc
gcgcgaagcgaaggttacaacatagcgaacgtttcgaatcagtatctcgttccaaaagat
ggcacacctttgagcggtttgattcaagatcacatggtttctggtgtacgattaacgctg
agaggaaaattcttctcgagagaagattatatgcagttagtttactctgcactgacggac
gttcagggtgatctgattttgttgccacctgctataataaagccgaagttattgtggtca
ggtaaacaaatattgtcgacggtaataataaatgccacaccaagaggcagggcaaaaatc
aatttaacagcaagtgcaaagatcggtcctaaagcatgggaaactagaaagccacgacga
tggaaatgcggcacagaattcgatgatccaaaaactatgtcggaagccgaagttattatt
cgtaacggtgaactgctttgcggtgttcttgacaaaatacattacggagctacaccgtac
ggactgatacactgcgtctacgagctctacggaggcgctcactcgagtaaactactgagc
gcgtttggaaaattgtttcaatcacatctccaaagagaaggtttcactctaggcatagaa
gatattttgattctaccaaatgccggtgacaaacgtacgaagttcatcaaggaatgtcgc
acgattggcgaaagtacgcagaaagctgccttagaagtgcccgacgatacaccgatagaa
gaagtaaaagcacaactgcaaaagtcttatctacggaatccaaagttccaagccatcgtc
gaccggaagtacaaaactgctctggatgtattcaccaacgacataaacaaaacctgtcta
cccgctgggctgtttaaaaaatttcccgacaataacctacagctgatggtccagtccgga
gccaaaggttccaccgttaacactatgcagatctcctgtttactcggacagatagaattg
gaggggaaaagaccaccgctcatgatcagcggtaaaagtcttcccgcttttgctccttac
gatccgacaccacgagctggtggttttatagacggtcgttttatgacgggcatccaaccg
caagaattctttttccactgcatggcaggtagagaaggtctgatcgatactgctgtgaaa
acgagtagatccggatacctgcaacgatgtttgatcaaacacttggagggcttgaccgtc
tcctacgattcaacggttcgcgactccgatgggagcttgatccagctgaactacggagaa
gatggtctcgacgtaccgagttcccaatttttgaaaaaggagcagctggacttcctggtt
gacaacaaaaacgccattctcgaaccagaactgttgaacggcttgcgggatttgagcacg
caaaaaatattgaaaatcggaaggaagatacagaaatgggtaaagaagcacggtagtcca
ttgcagaaacgaaggacgagcgaattcgtcgaattttgcactgaacactcggggagcgac
gtactcaaacacagcaagatcatcgaatcctgcgggaggagcaagggtgctctgatcctg
atgaagaaatggataaaatctgacgaggagacgaagctaaagtacaaagacaaatgcacg
cactgtcccgatcctctgttttctcgtcacacccaggattccaactacggagttttaacc
gagagggtggagggtttgatcaacgattacctttcgagtaaacgatctccgatcgacaaa
gatcagttgcgagatattctctctttgaaagtgatgaagagtctctgtcaaccgggggaa
ccggtgggattgttggcggcgcaatcgatcggagaaccttcgactcagatgactctgaac
accttccactttgccggacgtggagagatgaacgtcaccctcggaatcccgaggctccga
gaaatcctgatgatggcttcgcagaatataaagacgccgtcgatggaaataccgttcaaa
tcacagctgcccaaactggaaaaacgggccgacaaactacggctgaaactgacgaggtgc
acgctagccaacgtattgaccaacgtcaacgtcgacgggtgtctggaactctggccgcag
aggagaatggtttacacgttgaccatgcagttcttacgccgtaaaagctataagcgagaa
tattcggttcaaccgatatacgtcctgacgaaaacggaaaattcgttcttccgagacgtc
ttcagagagataaagaagtctgccaaagcctccggggccttgttgcacgtggaagaggat
aagaaacccgtcgacgacgatcagctggacgccaacgagtcggagatcagtgacgcgaat
cggcgaagaggcagactggatttgggcgagacgcacgaatcttccgacgaggacgaacct
gcggaagatgcggatgcgacgacggccagatccatcgctaggcaccaagaaaatcaggaa
tacgaggacccggaggaggcgagcgacgagtccgacgacgagatcgaagacgacgacgac
gacgaggccgccgaggcgcaaaatgaagaaaagcaggagaaggacgaggacgaagccgac
gatctggacgtcgcgaaccggaggaaaaaggttatcgacatgtatcccaacgcgatcgac
tatgaatttgacaagaagaaatacctgtcgtgcaagttgaaattctggctcccgctacgg
atggcgaagctagatctgtcccggatcctcagaacagtcgcggaaaaggtcgtactctgg
gaaactcctctgataaggagagcgtttacattccaaaatgcgagtgacgagaccatttta
aaaaccgatggactgaacatagtggaaatgttcaagtataacgaaatcctggagctgaac
agattgtactctaacgatatctacggtatttcacaaacctatgggatcgaagcagcgaac
agagtcatcgtcaaggaagtaaaagacgtgttcaaaatgtacggaatcaccgtcgaccca
cgacacttgctgctcatcgctgactacatgacgttcgatggaactttccagccattgagt
cgaaagggaatggagaattctgcttctccgctgcagcaaatcagcttcgagagctccctc
actttcatgaaaaatgctgctgttcaaaataagaaagatgatctttcttccccatcgagt
cgtttgatgttgggtcagccttgcaaatctggaacaggactgttcactctgatgaatcga
atggacgcggagttgacggcgcaataa
DBGET
integrated database retrieval system
